Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03208 ATGCTCATACATTTCAAATTCACAATCCGTTACTCTCAATTCTGTTGCCCATTCCCTAGTTTAGCAACAAAAGTTGTAAATTTGCCACTCCTTCCTCTCAAAAAGGGTTTGCTTTCGGTGTCTCTTACCTTGAAAATGTCTGCTGCTGTGTCTTCCACAACTTCTCGTTTTGTGGAAGAGCTCAAAAACAAACCAACCGACAACGACAACAGCAGCAACGTTGTTGGTGGCGAACCAGAGCAGCCCCCGTACAGTGATAGTGCCAACTCTGATGTTGCAGAAGAGACTGAGCCAGAGGAAGATGATGATGATTCCAAGTTGGAATCTGACAGAGAACTGGATATTGGTCCCCAAATCACCCTCAAGGAACAGCTTGAGAAAGATAAAGATGACGAGAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGCAGTGTTGATATGTCTTTCGTTGGAGCAACTAAAGACCCTGATGTGAAGATTTTGAGCCTCACTATTACAAGCCCAGACAGGCCTGATCTCGTCCTGCCAATTCCATTTACAAATGATCCTAAGAAAAGCCTCTTCATCCTCAAGGAAGGAAGCAAGTGCGCCATGAAATTCACCTTCTCTGTCTCCAACAACATCGTTTCTGGTCTCAAATACACGAATGTTATTTGGAAAACTGGCGTTAGAGTGGCCAGCAGAAAAAAGATGTTGGGAACTTTTAGTCCCCAGAAGGAACCGTATACGTATGCATTGGAAGAAGAAAGCACCCCTTGTGGCATGTTCGTCAGGGGAACCTATGCAGCAAGAACCAAGTTTGTAGATGACGATCAAAAATGCTACTTGGACGTCAATTACTACTTCGAAATTCAGAAGAATTGGATAAAACCTGAATGA 879 0.4357 MLIHFKFTIRYSQFCCPFPSLATKVVNLPLLPLKKGLLSVSLTLKMSAAVSSTTSRFVEELKNKPTDNDNSSNVVGGEPEQPPYSDSANSDVAEETEPEEDDDDSKLESDRELDIGPQITLKEQLEKDKDDESLRKWKEQLLGSVDMSFVGATKDPDVKILSLTITSPDRPDLVLPIPFTNDPKKSLFILKEGSKCAMKFTFSVSNNIVSGLKYTNVIWKTGVRVASRKKMLGTFSPQKEPYTYALEEESTPCGMFVRGTYAARTKFVDDDQKCYLDVNYYFEIQKNWIKPE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03208 292 SUPERFAMILY E set domains 95 288 IPR014756 -
Vian2g03208 292 Gene3D Coagulation Factor XIII, subunit A, domain 1 111 289 IPR024792 -
Vian2g03208 292 MobiDBLite consensus disorder prediction 60 119 - -
Vian2g03208 292 MobiDBLite consensus disorder prediction 92 108 - -
Vian2g03208 292 MobiDBLite consensus disorder prediction 67 91 - -
Vian2g03208 292 PANTHER RHO GDP-DISSOCIATION INHIBITOR 95 288 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vian2g03208 292 Pfam RHO protein GDP dissociation inhibitor 100 287 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vian2g03208 292 FunFam Rho GDP-dissociation inhibitor 1 111 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03208 Vian-Chr2 52433760 52435063 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03208 K12462 - gmx:100797593 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03208 2 52433760 52435063 Vian1g02648 1 39138491 39139847 PCT