Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02648 ATGTCTGCTGCTGTTTCCGCAACCAAGGATGTTCCCTTCAATTCTCAGTTGGAGGAAGACCTTAAAAACAAAGGAACCAATAACAAGGTTGTTGGGGAAGCAGACCGTGTTCCTTACACTGAGGATGCGGAAGGAACTGAGTCAGAGGCAGAGGAAGACCCCAAGTTGAAATTGGATCTTGGCCCTCGGTTTTCCCTCAAAGAACAGATTGAGAAAGACAAAGATGATGAAAGTTTAAGAAAATGGAAAGAACAGCTTCTGGGAAGTATTGATGTGTCTGCTGTTGGAGGGAGGCCTGAGCTGATTTTACCAATTCCATTTACTTCTGATGCGAAGAAGAGTATCTTCATTCTCAAGGAAGGAAGTCAATACCGCTTGAAATTCTCCTTCACTGTCTCCAACAACATTGTTTCCGGCCTCAAATACACCAATGTTGTTTGGAAAACTGGGGTTAGAGTGGACAACACCAAAAAAATGTTGGGAACTTACAGCCCAAGGCAGGAACCATATACGTATGAATTGGAAGAAGAAACTACCCCTTCAGGGTTATTCGCTAGGGGAACCTATTCAGCAAGAACCAAGTTTGTAGATGATGATCGCAAATGCTACTTGGACACAAATTACTACTTTGAAATTCAGAAGAGTTGGCCTACACCCAGTTAA 663 0.4299 MSAAVSATKDVPFNSQLEEDLKNKGTNNKVVGEADRVPYTEDAEGTESEAEEDPKLKLDLGPRFSLKEQIEKDKDDESLRKWKEQLLGSIDVSAVGGRPELILPIPFTSDAKKSIFILKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGVRVDNTKKMLGTYSPRQEPYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDTNYYFEIQKSWPTPS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02648 220 PANTHER RHO GDP-DISSOCIATION INHIBITOR 45 217 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vian1g02648 220 PRINTS RHO protein GDP dissociation inhibitor signature 153 168 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vian1g02648 220 PRINTS RHO protein GDP dissociation inhibitor signature 195 212 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vian1g02648 220 PRINTS RHO protein GDP dissociation inhibitor signature 136 152 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vian1g02648 220 Gene3D Coagulation Factor XIII, subunit A, domain 1 57 218 IPR024792 -
Vian1g02648 220 SUPERFAMILY E set domains 44 217 IPR014756 -
Vian1g02648 220 MobiDBLite consensus disorder prediction 1 57 - -
Vian1g02648 220 Pfam RHO protein GDP dissociation inhibitor 46 214 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vian1g02648 220 FunFam Rho GDP-dissociation inhibitor 1 42 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02648 Vian-Chr1 39138491 39139847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02648 K12462 - gmx:100806852 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03208 2 52433760 52435063 Vian1g02648 1 39138491 39139847 PCT