Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03191 ATGAAGCGGCAGAGCAGAGTGTTTGCGGTGATGTTTGTGGTGGTGATGGCATCGTGTGGGTGGATGAAGGTGGCGGAAGGCGATGATTTGTCGACCAAGTGCGCGTCGGCGATTGACAAGGTTCCTCCGTGTTTGACTTTCGCGACGGGGAAGGAAGATAAACCGAGCGACGGTTGCTGCGCCGCAACTTCAAGCATAAAGCAGAGCAACCCAGAATGTTTGTGTTACATCATTGAAATGACTCACAAGGGTAGCCCACAGGTCAAAGAGTTGGGTATTAAAGAAGACAGGTTGCTTCAACTCCCTTCCGCTTGCAACATCAAGAACGCCAGCATCACCGACTGTCCCAAGCTTCTGGGTCTATCACCAAGTTCCCCTGATGCTGCAATCTTCACGAACTCTTCGAAGGTAACGCCTGCAACATCAAACACAGCAAGTACGACCCCACAAAGCCAAAACGCTTCGCATGGAAGTATGGTTATACCTAGTATGCCGATGATGATAAGTTTGACCGTTGTTGTGGCTGCAATTTCACCTGTTTTTGTGAGCATTTATACATGA 561 0.492 MKRQSRVFAVMFVVVMASCGWMKVAEGDDLSTKCASAIDKVPPCLTFATGKEDKPSDGCCAATSSIKQSNPECLCYIIEMTHKGSPQVKELGIKEDRLLQLPSACNIKNASITDCPKLLGLSPSSPDAAIFTNSSKVTPATSNTASTTPQSQNASHGSMVIPSMPMMISLTVVVAAISPVFVSIYT 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03191 186 Gene3D - 31 112 IPR036312 -
Vian2g03191 186 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 115 IPR036312 -
Vian2g03191 186 Pfam Probable lipid transfer 16 115 IPR016140 -
Vian2g03191 186 SMART aai_6 34 115 IPR016140 -
Vian2g03191 186 CDD AAI_LTSS 43 107 - -
Vian2g03191 186 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 164 IPR043325 -
Vian2g03191 186 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03191 Vian-Chr2 52338878 52340466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03191 33 181 Acyl Lipid Metabolism Gene Families AT1G27950 44.667 2.74e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03191 - - gmx:100305718 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03191 2 52338878 52340466 Vian1g02665 1 39705499 39706760 PCT