Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02665 ATGAAGGGTGAGCAGAAAAAAATGACAGTAGTGGTAGCAGGGTTGCTGTGGGTGTTTGTGTTGGGTGTGGGGGCGTCGGAGGAAGGAGATTTGGCTGCGCAGTGCAACCTGCTGGTGCAGAAAGTGCTTCCGTGTCTGAGCTTCGCGACGGGGCAGGCGGCGGTTCCGACGAAGGAGTGCTGCTCGGCGACGTTGGAGATAAAGAAGAGCGACCCGAAGTGCCTGTGCTTTGCGATCCAGCAGACGCATAAGGGGATCCCTGAGGCGAAGAGCATGGGCATTCAAGAGGGTAGGCTCCTTCAGCTCCCTTCTGCCTGTAACTTGAAGAACGCCAGCACCACCGATTGTCCTAAGCTTCTGGGTCTATCTCCAAACTCCCCTGACGCTGCCATGTTCAGGAATGGTTCATTGAAAATTAATTCGACTTCAACGTTGGGAACTGCAAGACCACTCTCAGACACCCAGAAGGCCTCGTTTGGAACCATGCTTCTTCCACCTCCTCTCACGCCACCACACCTAGCTGCACTGCTTTGCGCCATTCTCCTCCTTCTCACAACTTTAATTTAA 567 0.5397 MKGEQKKMTVVVAGLLWVFVLGVGASEEGDLAAQCNLLVQKVLPCLSFATGQAAVPTKECCSATLEIKKSDPKCLCFAIQQTHKGIPEAKSMGIQEGRLLQLPSACNLKNASTTDCPKLLGLSPNSPDAAMFRNGSLKINSTSTLGTARPLSDTQKASFGTMLLPPPLTPPHLAALLCAILLLLTTLI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02665 188 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 18 146 IPR043325 -
Vian1g02665 188 CDD AAI_LTSS 42 108 - -
Vian1g02665 188 Gene3D - 32 114 IPR036312 -
Vian1g02665 188 Pfam Probable lipid transfer 22 116 IPR016140 -
Vian1g02665 188 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 116 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02665 Vian-Chr1 39705499 39706760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02665 34 144 Acyl Lipid Metabolism Gene Families AT1G27950 55.856 1.10e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02665 - - gmx:100799403 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02665 1 39705499 39706760 Vian1g02665 1 39705499 39706760 ECH
Vian2g03191 2 52338878 52340466 Vian1g02665 1 39705499 39706760 PCT