Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03185 ATGGCCAAGACCGAGTTGGAGGTAACGGTTGACAGGAAGAATAAAGACCTAAAGCACCTGGGGTTTGTGAGGATTGCTGCTATTCAAACCTTTGTGTTTGTGTCAAATCTGTATGAGTACGCAAAGCAAAATTCTGGGCCTTTGAGATCTCCTGTTGGAACGGTGGAAAACACTGTAACCACCGTTCTTGGTCCAGTATGCAACAAGTTCAAGGGCTTCCCTGATGATGTCCTGGTTTTCGTTGACAAAAAGGTGGATGAAGCTACACAGAAGTTCGATGAGCATGCTCCTCCCGTTGCTAAGCACCTCGCGAATCTTGCAAAAAGTTTGATTCAGAAAGTGGCAAACGAGGCAGGGAAAGTTGCTGGTGAAGCTCAATCTGGGGGGCCAAGAGCAGCTGTGCATTATGTGGCTACAGAGTCAAAGCATTTTGTGTTGATAAATTCAGTTAAGTTGTGGAATGGACTCGACCATTATCCACCATTCCATGCATTGGCAGAGATGGCAGTTCCCACTGCTGCTCACTGGTCAGAGAAGTACAACCATGTGATCAAGGCCATGACTCAAAAGGGTTACTGTTTTATTGGGTATCTACCGTTGATTCCCATTGATGAGATTGCGAAGGCATTTAAACAGTGTCAGGGGAACTTGAAAGGAGATGATGCAGCCTATGTTCAAAAGAGCTCAGAATCATCATCTGATTCTGATTAA 711 0.4515 MAKTELEVTVDRKNKDLKHLGFVRIAAIQTFVFVSNLYEYAKQNSGPLRSPVGTVENTVTTVLGPVCNKFKGFPDDVLVFVDKKVDEATQKFDEHAPPVAKHLANLAKSLIQKVANEAGKVAGEAQSGGPRAAVHYVATESKHFVLINSVKLWNGLDHYPPFHALAEMAVPTAAHWSEKYNHVIKAMTQKGYCFIGYLPLIPIDEIAKAFKQCQGNLKGDDAAYVQKSSESSSDSD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03185 236 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Vian2g03185 236 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 8 227 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03185 Vian-Chr2 52288009 52289519 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03185 - - gmx:100816931 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g03185 2 52288009 52289519 Vian1g02669 1 39887275 39888631 PCT