Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02669 ATGGCCACCACCACAGAGAGGGATGTGGAGAACAAGGGCCACGAAGGACTGAAACATCTTGGGTTTGTTAAGATTGCGGCCATTAAAGGCTTTGTGTGTGTTTCGAATCTCTACCACTTCGCGAAGCAAAATTCAGGACCCTTGAGATCTGCTGTTGGAACCGTCGAAGATACAGTAACTACTGTTCTGGGTCCTGTCTACCACAAATTTAAGGGTGTCCCAAACCGTCTTCTCCTTTTTGTGGACAATAAGGTGGATGAAGCAACCCACAAATTCGATGAGCATGCACCTTCTCTGGTTAAGGAAGTTGCAAGCCAAGCGAATTGTTTGGTCCAGGAAATGACAAACAAGGCTGAAAAAGTAGTGAGTGAGGCTCAATCTGGTGGGGCACGAGGAGCAGCACAATATGTTGCCAGAGAGTCAAAGAAAATTGTGGTGTTTAGTTCTGTGAAATTGTGGGGTGGTCTCAACCACTATCCATCATTCCATGCAGTGGCAGAAATAGCAGTTCCCACTGCTGCACACTGGTCAGAAAAGTACAACAATGTGGTGAAGGGAATGGGTAAAAAGGGTGGTGGTGTGTTAGGGTATTTGCCTCTGATTCCAATTGATGACATAGCCAAGGCGTTTAAGCAGGGGGGAGGCAATGTGAATGAAGATGAAGCAGGTTCTGAAGGAGAGGATTCTTCTTGA 693 0.4646 MATTTERDVENKGHEGLKHLGFVKIAAIKGFVCVSNLYHFAKQNSGPLRSAVGTVEDTVTTVLGPVYHKFKGVPNRLLLFVDNKVDEATHKFDEHAPSLVKEVASQANCLVQEMTNKAEKVVSEAQSGGARGAAQYVARESKKIVVFSSVKLWGGLNHYPSFHAVAEIAVPTAAHWSEKYNNVVKGMGKKGGGVLGYLPLIPIDDIAKAFKQGGGNVNEDEAGSEGEDSS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02669 230 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 13 218 IPR008802 -
Vian1g02669 230 Pfam Rubber elongation factor protein (REF) 14 212 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02669 Vian-Chr1 39887275 39888631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02669 - - gmx:100499806 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02669 1 39887275 39888631 Vian1g02669 1 39887275 39888631 ECH
Vian2g03185 2 52288009 52289519 Vian1g02669 1 39887275 39888631 PCT