Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03131 ATGCAACGTGATAATCTTATAAAGAAGCTCCTCCTTACACATGATCCAGATGGTCGTAGGTTGGATTCTGAGGCAATTCTTCTTGCAGTGACTTGTAATTTATATTCTGCTTCCTTTCATAAGACGGATATAACTGAAATTGAAACGATTGGTTGTAGTGAATCGGTAGGATTCATCATCACAAAAATATGCAAGATGCTCTGCAGATGCTCTGGTGAAGGTGATATTAACTCAAGGGTCATAAATTTGTTTGATTTGATAGGGAAGTATAGCTGGGACGCAAAAGTAGTTCTAGTGCTTGCTGCTTTTGCTGTAAGATATGGTGAATTTTGGCAACTTATGCAGCTACATTATGATAACAGTTTGGCAGCTTTAATTTCAAGTATTAAGAAGCTTCCCTGCAACTTAAAGCCACTGAAGCTACAAATCAAGGCATTGAGCTTGTTGGTTGAGACCATGATGGATGTGGCTATGTGTATAATTAAGTACTCAGATTCAGCAATAATTGCTGCTTGGGAGCTTTCAAGTTTGGCGTATAGATTAAGTGGCACACGCTGCAATCTTAGAAGACAGGTGGATCTGTGTTACGAAGAAATAGAGAGAAACTTGTATCAGAGGCTGTCGGATCTTGCTCGTGAGGAGCACATTGATAATCAAAAGATTCTCACTTTATTTTTTCCTTCAAATAATTACTTGCCACTGAAGGATTGCTCAACAGAAGTAAAGGAAGAGCTGTGGCAAGACCAAAATTTGACAATGCAACTTTTGCTAGATGAGATCAATCCTCTCCTTGCTTATTGGGTTGAGCAAGGCAAAAGTATTTGCCTTTATGGGAGTGAAAACTTGGTTTGGATCCAACAATTCAATGATAAGATAACTGAGCTCAAACGAGCAGGTCTGCAGCTGGAAACAATATATGTTGGTAATAGTCAATTGGGTGAACATGTTAAGCAAATAATGGCAAGAAGTGGTGCAACAAGTCGCAGTGATCCACTTTCCTTCACAAACGTGCAATTCTTCTGGCTTCGGTTGGCGAGTATGTTAAGGTCTAAACTCAGACTAGGGAAGACACCAAGTGGTGATTATGTACTAGCAGAGTTGTCAGCTTTGCTTAAAATGGATGATAGGGAGGAAGGTTGGGCAGTGATTGGAAGTGGGGGTTCAACAGATATTATCAGGCTTCGAGGGATGCAGGTGATGGAATTCTTAAGGAAATGTTCTGTGTGGAGAGAAAATATAACCAAGTTTGGATTGTGGGGTGCTCCAACAAACATCCTAGAAGCTGATTTTGTTGAGGGGAGTTGCACTCACTCTTACTTTGTTCCCTCAAGAAAAAATGGAAGACTGAGTCAAGGAACTGTAATTTGTCAAGTGTGCAAGCGTCCCATGAAGAAGTTCGTGGTGTACAAGCCATGA 1416 0.4047 MQRDNLIKKLLLTHDPDGRRLDSEAILLAVTCNLYSASFHKTDITEIETIGCSESVGFIITKICKMLCRCSGEGDINSRVINLFDLIGKYSWDAKVVLVLAAFAVRYGEFWQLMQLHYDNSLAALISSIKKLPCNLKPLKLQIKALSLLVETMMDVAMCIIKYSDSAIIAAWELSSLAYRLSGTRCNLRRQVDLCYEEIERNLYQRLSDLAREEHIDNQKILTLFFPSNNYLPLKDCSTEVKEELWQDQNLTMQLLLDEINPLLAYWVEQGKSICLYGSENLVWIQQFNDKITELKRAGLQLETIYVGNSQLGEHVKQIMARSGATSRSDPLSFTNVQFFWLRLASMLRSKLRLGKTPSGDYVLAELSALLKMDDREEGWAVIGSGGSTDIIRLRGMQVMEFLRKCSVWRENITKFGLWGAPTNILEADFVEGSCTHSYFVPSRKNGRLSQGTVICQVCKRPMKKFVVYKP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03131 471 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 170 241 IPR039299 GO:0010088
Vian2g03131 471 Pfam Sieve element occlusion N-terminus 4 164 IPR027942 -
Vian2g03131 471 Pfam Sieve element occlusion C-terminus 242 470 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03131 Vian-Chr2 51892199 51895532 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03131 - - pvu:PHAVU_001G256100g 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03479 1 57335322 57338424 Vian2g03131 2 51892199 51895532 PCT