Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03479 ATGGAAATGGTACCTCGGAAGATGCAATCCAGGGCTAGCCGCCATATTTTTTCAGCATCAGATGACACTACAATGACCAAAAATGTTCGAGCCACCCATGCTCCTGATGATCGACACGTTGAAGTTAGACCTCTTCTGAATGTTGTCCAAGACATATTTCTCCGTGTTGCCTCTCTCATCCCTGACATTGTTAAGGGAAAACCAGTGCAAATGGATGCTATGAAGGATAGTATCCAGCAATCAAATCTGACCGAGGTAATGTTGGATGTAACCAATTACATTGTTGAATTCCATGAGCTTCCCTCTCGGTACATTGACCCTGAGGCGCCGGAGATGTTGACTGCCTCCACTCTTATCCCCGGTGCTGTCTATTGGACCATTCGGAGTTCTGTGTCCTGTGCATCGCATCTTTTAGGCATAACTGGCTTGATTCATGGATATATGACAACAGTGGTAGAGAGTTGGGAACTTTCCAGTTTGGCGCATAAGCTTGATAACCTAAATGGCCACCTTCGCAAGCAACTCACCCTTTGTCAACTGCATTTAGATGACAACAAACAGAGAGAAGCATTTGAAACACTTCGGCTCCTTTTTGAGACACCCCACCAAGATAACTTGAAGGCTCTCAAAGCTATGTTTTGCAGTAACGATGATCCGTTGCCATTGTTTGATGGTTCTTCCAAACAAAGGGTTAGCATTGATGTATTGAGGAGGAAAATTGTTCTACTCTACATATCAGACCTACATAACGTCCCTGATCAAGAGCTTGTGATATTTGAACAAATGTACCTAGAGTCACGTCAGGATTCAACCAGGTTAGAGAGTCAGTATGAACTCGTTTGGATTCCAGTTGTGGACAAGGAAATCCCATGGACTGAATTGAAGCCGAAGCTTGAGAAGCTGCAATCAACGATGTCATGGTACTCAATTTATGACCCTTCTGTTCTGGAGCCTGCAACCATCAGGTACATTAAAGAAGTATGGCTTTTCAAAGCGAAGCCTATACTTGTTAATCTGAATGCATTACCCATGATGTGGATTTGGGGAAGCTCGGCTTACCCTTTCTCTAGCTCAAAGGAGGAAGCATTGTGGAATAATGAAACATGGGGACTTCTTCTATTGGCAGATACAATCGATCCATCGCTTCTGTATTGGATATCAGAAGGCAAATATATATGCTTGTACGGAGGGGACGATATGGACTGGATCCGCAAATTCACAAGCACTGCGCATTCACTGGCAAAAGCTCTGCAACTACCACTAGAGATGATTTATGTTGGGAAAAGCAATCCAGGTAAGAAAGTTCAAGAAATCAACAATGCCATACAAGAAGAAAAATTGAGCACCGTGCTCCCTGACCTTGCGATAATTTGGTTCTTCTGGGTTAGGCTAGAGAGCATGTGGCAATCCAAATCACAGCATAGCAAGACAGTAGAGGAAGACCACATAATGCATGAAGTAATGAGAATCCTAACCTACGATAGTGGTGACCCAGGATGGGCCGTAATTAGTCAAGGCACAGGAAGGATGGCACAGGGTAAGGGAGATACGTTTCTAAGGTGCCTGAACGAACATGAGCAGTGGATAGCAACAGCAAAAGATAAAGGGATCTTGCCAGCAATGGCTGATTATATACAAGGACTACATACCCCTCACCACTGCAACCGCTTGATCCTTCCAGGTGGCAGTGGCGAGGTACCAGACAGAGTGGTCTGCGCTGAATGTGGCAGAACAATGGACAAGTTCTACATGTATCGCTGCTGTAACGAGTAA 1773 0.4456 MEMVPRKMQSRASRHIFSASDDTTMTKNVRATHAPDDRHVEVRPLLNVVQDIFLRVASLIPDIVKGKPVQMDAMKDSIQQSNLTEVMLDVTNYIVEFHELPSRYIDPEAPEMLTASTLIPGAVYWTIRSSVSCASHLLGITGLIHGYMTTVVESWELSSLAHKLDNLNGHLRKQLTLCQLHLDDNKQREAFETLRLLFETPHQDNLKALKAMFCSNDDPLPLFDGSSKQRVSIDVLRRKIVLLYISDLHNVPDQELVIFEQMYLESRQDSTRLESQYELVWIPVVDKEIPWTELKPKLEKLQSTMSWYSIYDPSVLEPATIRYIKEVWLFKAKPILVNLNALPMMWIWGSSAYPFSSSKEEALWNNETWGLLLLADTIDPSLLYWISEGKYICLYGGDDMDWIRKFTSTAHSLAKALQLPLEMIYVGKSNPGKKVQEINNAIQEEKLSTVLPDLAIIWFFWVRLESMWQSKSQHSKTVEEDHIMHEVMRILTYDSGDPGWAVISQGTGRMAQGKGDTFLRCLNEHEQWIATAKDKGILPAMADYIQGLHTPHHCNRLILPGGSGEVPDRVVCAECGRTMDKFYMYRCCNE 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03479 590 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 79 589 IPR039299 GO:0010088
Vian1g03479 590 Pfam Sieve element occlusion C-terminus 358 589 IPR027944 -
Vian1g03479 590 Pfam Sieve element occlusion N-terminus 81 202 IPR027942 -
Vian1g03479 590 Pfam Sieve element occlusion N-terminus 20 86 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03479 Vian-Chr1 57335322 57338424 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03479 - - gmx:100799626 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03479 1 57335322 57338424 Vian1g03479 1 57335322 57338424 ECH
Vian1g03479 1 57335322 57338424 Vian2g03131 2 51892199 51895532 PCT