Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g03126 ATGAAGTGCTTCTCCTCATCCTCCGTCTCTCTCTTTATTTTCCTTTGTCTATGTTTTGAGAGTGTGTGGTCTCAAAATGTATCGGAGAGTGATCGACAGGAAGCTAGCATTCCACCAAGAGGTTGGAACTCCTATGATTCCTTTTCCTGGACAATATCTGAAGAAGAATTCTTGCAGAGTGCTGAAGTAGTTTCTCGGCGTCTCCATGATTATGGATATGAGTATGTTGTGGTGGATTACCTCTGGTATAGAAGGAAAGTTGAGGGTGCTTATCATGATTCTCTTGGATTTGATGTGATTGATGAATGGGGGAGGATGCTTCCTGATCCAGGAAGGTGGCCTTCTTCTGAAAATGGGAAAGGATTTTCTGAAGTAGCTAATCGAGTACATGGCATGGGTTTGAAATTTGGGATTCATGTCATGAGAGGGATAAGTACACAAGCTGTAAACGCAAACACCCCTATCCTTGATACAAAAACGGGAGGTGCTTATCAAGAATCTGGTCGAGTGTGGTATGCAAAAGACATAGCAATCCCAGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTGAATACAAATTTGGGAGCAGGAAAAGCTTTTCTGAGATCCCTTTATGAGCAGTATGCTTCATGGGATGTTGATTTTGTGAAACATGACTGTGTATTCGGGGATGACTTTGATTTAAATGAAATAACCTATGTTTCTGAGGTTCTCAAGCAGTTTGATCGCCCCATTGTGTATTCTTTGTCTCCTGGAACTAGTGTGACACCAGCCATGGCCAAGGATGTCAGTGGACTGGTCAATATGTATCGTGTAACAGGAGATGACTGGGATACATGGGGGGATGTCAAATCACATTTTGATATTGCCAGGGATTTCTCAAATGCTAATATGATAGGAGCAGAAGGTTTAACGGGGAAATCTTGGCCTGATTTGGATATGCTACCCTTTGGATGGCTAACTGATCCTGGTTCAATTGAAGGTCCACATAGGTTTAGTCGTCTCAATCTGGAAGAAAAGAAGACACAGATGACTCTTTGGTCTATGGCAAAGTCTCCCCTTATGTATGGTGGGGATGTTCGGAAGATTGATCCTAGTACATATGATATTATCACAAATCCCACCCTTCTCGAGATTAATTCTTTTAGCTCAAATAATATGGAGTTTCCTTATATCACAATTGTGAAGAGTGAAGATCAGGATCTTAGTTTGAGAAGAAGTGGCAAAGAAATAAAAACAACTTTCACCCATTCATTAGGCCTCACAAAGTGCACCGAGTCAAAGGCAATAGGTTGGGCTAGTGAAAGGCTTAACCTATATCTTGAAAGAATATGTTGGAAAAGGAGTTTAGGAAACAAGCATCTTGCCCCCTTCTGTGTGCACAAAAGAGAACTTTACTTCCCATTAGATGAAGTGAGTATGTATCAAGAGTATCATCACGGGAAACATCACTTAGTTGCAACAAACAGAATAAAATTTTGCTTGGATGCTTCTCCAAAACGCAAGCTCACCTCTAAAGAGTTCAAGAGAGGGACATTTTCTACCTGCAGGTGGGATTCAAATCAGATGTGGGAATTGAATCCTAATGGGACCCTGGTCAATAGTTATTCTGGCTTGTGTGCAACAGTAGAGTCTACCGAAGATACTATTAATTCTGGTGGCTTGCGCTCTTGGATTGCTACAGGAAGAAAAGGAGAAGTCTATATTGCTTTCTTCAATCTAAATGAACAGAAGACAGTAATGTCTGCACAGGCATCTGACCTGGCTAAGTTTCTTCCTGCCAGAGACTTCAGAGACTTCAGTTCTTGTGAGGGCAGTGAAGTGTGGAGTGGAAATGCTGTAGAAATAACACAATGGAGGCTATCAGCAGCAGTGGAAATGCATGGAAGTGCACTAATTGTTCTGAAATGCAGCTAA 1926 0.4174 MKCFSSSSVSLFIFLCLCFESVWSQNVSESDRQEASIPPRGWNSYDSFSWTISEEEFLQSAEVVSRRLHDYGYEYVVVDYLWYRRKVEGAYHDSLGFDVIDEWGRMLPDPGRWPSSENGKGFSEVANRVHGMGLKFGIHVMRGISTQAVNANTPILDTKTGGAYQESGRVWYAKDIAIPERACAWMPHGFMSVNTNLGAGKAFLRSLYEQYASWDVDFVKHDCVFGDDFDLNEITYVSEVLKQFDRPIVYSLSPGTSVTPAMAKDVSGLVNMYRVTGDDWDTWGDVKSHFDIARDFSNANMIGAEGLTGKSWPDLDMLPFGWLTDPGSIEGPHRFSRLNLEEKKTQMTLWSMAKSPLMYGGDVRKIDPSTYDIITNPTLLEINSFSSNNMEFPYITIVKSEDQDLSLRRSGKEIKTTFTHSLGLTKCTESKAIGWASERLNLYLERICWKRSLGNKHLAPFCVHKRELYFPLDEVSMYQEYHHGKHHLVATNRIKFCLDASPKRKLTSKEFKRGTFSTCRWDSNQMWELNPNGTLVNSYSGLCATVESTEDTINSGGLRSWIATGRKGEVYIAFFNLNEQKTVMSAQASDLAKFLPARDFRDFSSCEGSEVWSGNAVEITQWRLSAAVEMHGSALIVLKCS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g03126 641 CDD GH27 38 383 IPR002241 GO:0004553|GO:0005975
Vian2g03126 641 Gene3D Aldolase class I 16 385 IPR013785 -
Vian2g03126 641 Gene3D - 550 640 IPR013780 -
Vian2g03126 641 PRINTS Glycosyl hydrolase family 27 signature 32 51 IPR002241 GO:0004553|GO:0005975
Vian2g03126 641 PRINTS Glycosyl hydrolase family 27 signature 341 362 IPR002241 GO:0004553|GO:0005975
Vian2g03126 641 PRINTS Glycosyl hydrolase family 27 signature 126 147 IPR002241 GO:0004553|GO:0005975
Vian2g03126 641 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 9 640 IPR002241 GO:0004553|GO:0005975
Vian2g03126 641 SUPERFAMILY (Trans)glycosidases 34 383 IPR017853 -
Vian2g03126 641 Pfam Alpha galactosidase A 208 383 IPR002241 GO:0004553|GO:0005975
Vian2g03126 641 CDD RICIN 479 546 IPR000772 -
Vian2g03126 641 SUPERFAMILY Ricin B-like lectins 495 559 IPR035992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g03126 Vian-Chr2 51838478 51843146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g03126 2 467 Glycoside Hydrolase AT3G26380 66.383 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g03126 - - gmx:100777954 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03489 1 57427297 57433546 Vian2g03126 2 51838478 51843146 PCT