Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02952 ATGATGCCTAAACCCATGAACGTTTTGACAACAAAGCCCTCACCTTTGAGTACCATGGTGGTGGTGCTGATACTCTGCATTCTGGGTTTCTACGCTCTGCATTTCCCTCAGTCTTCTACACCTTCCTCCTCCTCTCAAAACCTCTCTCAGGTGGAAAAACTTTTTCTCTCCACTTCCTCAAACTCCACCATTTCTTCCTACCTCCGCGCCCTCACCCTGCACCCTCACCTCGCCGGAACAAAACCCGGCTCCGATGTCGCCAGCTACGTCCTCAACCACTTCACTTCATTGGGACTCAAGACCCACACGGCGACCTACACCACGCTCCTCTCTTTCCCGGTTCACTCCTCCCTCTCAGCGCATTTTAGCGAAGGCCCCTCGGTGAGCCTCCGCCTCACGGAGCCGGCAGCCGCGGGCGTGGTTCCGGCCTACCACGCGTATTCGCCGTCGGGTGCGGTGCAGGCGCGTGCGGTGTTTGCGAACTACGGGAGGGAGAGGGACTACCGCGCGCTGGGAGCGATGGGAGTGAACGTGAGCGGGTGCGTGGTGATGGTGCGGAAGGGCGGGGAAATGGGGCGCGGCACAGTAGTGGAGAGAGCGGAGGCGCACGGGGCGGCGGCGGTGTTGGTTTACGGCGAGGGTGACACGTGGCGAAAGGGGTTTGAAAGGGGGCACGTGATGAGGGGAGGAATAGGGGACCCACTTACTCCGGGTTGGGCTGGGATTGAGGGTGGCGAGACACTGGGATTGGAAGATAGTGAGGTTTTGAAAAGGTTCCCCAAAATTCCATCTATGCCTTTATCAGCTGAGGTGGCGGACTCTATTTTGTCCTCTCTTGGGGGTTCTCCTGTGCCCCTTGAATGGAGGGGCACCCTAAGGTCTAAGGTCAGGCATGTTGGTCCGGGTCCCACCATCCTCAATTTCACTTACAAGGGTGAAAAGAAGGTGGCCAACATTCAAAATGTTTTTGCTGTCATAAAGGGGTCAGAAGAACCTGATCGATGTGTTCTGCTTGGAAACCACAGAGATGCATGGACGTATGGTGCTGTTGATCCCAGCAGTGGGACAGCTGCACTACTTGACATTGCTCGTCGGTTTTCTATTCTATTGGGCTTGGGGTGGAAACCAAGGAGGACAATAATTCTCTGCAGTTGGGATGCAGAAGAATTTGGGATGGTCAAGGATCCTGATTCTGAGGGTGTTTCAATATATGAGAATTGGGCTGCTGCTTCTGCTGGAAGCAATAACGAAATGCTTTTTGTCACTGCTGGCCAAATTCAGAGGCTCAGTGGAGTTGATTCTGATTTTGCTCCATTTGTGCAGCACGCAGGGGTTCCATCCATTGATATGTATTATGGAAGAGATTTTCCTGTCTATCACACTGCATTCGACTCCTATAACTGGATGGCAGAGTATGCAGATCCATTCTTCCACCGCCATGTTGCTGCTGTACAAAAACATGTTGAACAACTTGATAGATCAGAAAATTTCCCTACATCCATTAACTCTTTCAATTGA 1518 0.5277 MMPKPMNVLTTKPSPLSTMVVVLILCILGFYALHFPQSSTPSSSSQNLSQVEKLFLSTSSNSTISSYLRALTLHPHLAGTKPGSDVASYVLNHFTSLGLKTHTATYTTLLSFPVHSSLSAHFSEGPSVSLRLTEPAAAGVVPAYHAYSPSGAVQARAVFANYGRERDYRALGAMGVNVSGCVVMVRKGGEMGRGTVVERAEAHGAAAVLVYGEGDTWRKGFERGHVMRGGIGDPLTPGWAGIEGGETLGLEDSEVLKRFPKIPSMPLSAEVADSILSSLGGSPVPLEWRGTLRSKVRHVGPGPTILNFTYKGEKKVANIQNVFAVIKGSEEPDRCVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSILLGLGWKPRRTIILCSWDAEEFGMVKDPDSEGVSIYENWAAASAGSNNEMLFVTAGQIQRLSGVDSDFAPFVQHAGVPSIDMYYGRDFPVYHTAFDSYNWMAEYADPFFHRHVAAVQKHVEQLDRSENFPTSINSFN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02952 505 SUPERFAMILY PA domain 109 323 IPR046450 -
Vian2g02952 505 Gene3D Zn peptidases 309 393 - -
Vian2g02952 505 Pfam Peptidase family M28 321 392 IPR007484 -
Vian2g02952 505 Gene3D Zn peptidases 39 124 - -
Vian2g02952 505 Gene3D Zn peptidases 394 494 - -
Vian2g02952 505 FunFam N-acetylated alpha-linked acidic dipeptidase like 1 302 397 - -
Vian2g02952 505 Pfam PA domain 154 215 IPR003137 -
Vian2g02952 505 Gene3D - 125 308 - -
Vian2g02952 505 SUPERFAMILY Zn-dependent exopeptidases 60 486 - -
Vian2g02952 505 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 392 485 IPR039373 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02952 Vian-Chr2 50187691 50191674 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02952 K01301 - gmx:100798131 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02952 2 50187691 50191674 Vian2g02952 2 50187691 50191674 ECH
Vian2g02952 2 50187691 50191674 Vian3g02576 3 40047431 40063154 PCT