Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02913 ATGGGAGTGGTAACTGTTGCCGAATTGAAGCCTAGCATTTCAGGAAAAAGGACCTTTCGTCCAAGCTCAAGCATAAGACATGCCACCGAATGGCCAATATCTGACGTTTCCAGTGATCTCACCATCGAAGTAGGAGCATCAGCCTTCGCACTTCACAAGAACCATGAACATAATGCTACATGGTTTTGTTGGGCTGATATGTTTCCTCTTGTTTCTCGGAGTGGAAGAATTCGGAAGCTGCTGTTAGAAGCAAAAGATTCAAAAATTTTACGCGTAAGTCTCCCAAATGTGCCAGGTGGAGCAGAGGCATTTGAGCTAGCTGCCAAATTTTGCTATGGAATCAATGTTGAGTTCACTCTCTCAAATATTGCCTTGCTACGTTGCACGGCTCATTTTCTTGAAATGACAGAAGAATTTGCTGAAAAAAACTTAGAATCCAGAGTTGAAGCATACCTTAGGGACACAGTGCTACCTAACATATCAAGCACAGTGTATGTTCTTCACAGTTGTGAGGCCCTTCTTCCAATGTCAGAGGAAATAAACCTAGTCAATAAGCTAATCAATGCAATTGCAAACAACGCGTGCAAAGAGCAGCTTACATCTGGTTTACTAAAACTCGATCACAATTTCCCTTCCAAAACCACACCAACCATGGAGCCAGAAACACCCGCAGATTGGTGGGGGAAGTCTTTCAATGTTCTTAGTCTTGAGTTCTTCCAACGAGTTGTATCTGTTGTGAAGTCAAAGGGACTGAAACAGGACATGATCAGCAAGATATTGATGAACTATGCACACGGTTCACTTCAGGGGATTGGTGTTAGAGATCCCCAAGTGGTGAAAGGAAGTCTTCATGACATGGAATTGCAAAAGAAACAAAGGGTCGTCGTTGAAACCATAGTCGGCTTACTCCCAACTCACTCAAGGAAAAGCCCTGTTCCAATGGGATTCCTCTCAAGTTTGTTGAAAGCTGCAATAGCAGCACCTGCATCAACTCATTGCAAATCTGATCTGGAGAGGCGAATTAGTCTTCAACTAGACCAGGCAATTCTCGAAGACATCTTAATCCCAACAAACTCACCTCAAAACACCCACAACACCATGTATGACACTGACTCAATTCTGAGGATCTTTTCTATTTATCTAAACATGGACCAAGAGGATGGAGAAGACAGTGATAACTACATTGATGAAAGCCAAATGGTGTATGATTACGACAGCCCTGGATCTCCAAAACAAAGCTCAATTATAAAGGTATCGAAATTGCTGGACAGTTATCTCGCTGAAGTAGCTCTAGACTCAAACTTGTCGCCCTCAAAATTCACAGCACTTGCAGAACTACTTCCAGATCATGCACGTGTTGCAAGTGATGGACTCTATAGAGCAGTTGACATCTTCCTCAAGGTTCATCCAAACATGAAGGACTCTGAGAGATACCGGTTATGCAAAACCATTGATTGTCAGAAACTGTCTCAAGAAGCATGCAGCCATGCAGCACAGAATGAAAGGCTACCAGTGCAGATGGTGGTTCAAGTGCTTTACTTCGAGCAAATGAGGCTTCGCAACGCCATGAATGGAGGGCACAACCAATTCTTCTTCGGTCAGTTTCCTCACCGTTCAGGAAGCGGTGCAGGGAGTGGAGCCATTTCCCCGAGAGATAACTATGCATCAGTGAGAAGAGAGAACAGAGAACTGAAGCTTGAAGTAGCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGACCACGTGTCTATGAAGCAGGAGCTTGTTAAGTCTCACCCTGCCAACAAGTTGTTCAAATCATTCACCAGAAAGCTCAGTAAGCTCAATGCTCTGTTCAGGATAAATAGCATTAAGCCAATTGGTGGCAAGGCTTGTTCAGAAACTCGCTTCCCTTTTCCAAAGCGAAGACGCCACTCTGTTTCATGA 1929 0.4386 MGVVTVAELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASAFALHKNHEHNATWFCWADMFPLVSRSGRIRKLLLEAKDSKILRVSLPNVPGGAEAFELAAKFCYGINVEFTLSNIALLRCTAHFLEMTEEFAEKNLESRVEAYLRDTVLPNISSTVYVLHSCEALLPMSEEINLVNKLINAIANNACKEQLTSGLLKLDHNFPSKTTPTMEPETPADWWGKSFNVLSLEFFQRVVSVVKSKGLKQDMISKILMNYAHGSLQGIGVRDPQVVKGSLHDMELQKKQRVVVETIVGLLPTHSRKSPVPMGFLSSLLKAAIAAPASTHCKSDLERRISLQLDQAILEDILIPTNSPQNTHNTMYDTDSILRIFSIYLNMDQEDGEDSDNYIDESQMVYDYDSPGSPKQSSIIKVSKLLDSYLAEVALDSNLSPSKFTALAELLPDHARVASDGLYRAVDIFLKVHPNMKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMVVQVLYFEQMRLRNAMNGGHNQFFFGQFPHRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKSHPANKLFKSFTRKLSKLNALFRINSIKPIGGKACSETRFPFPKRRRHSVS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02913 642 Gene3D Potassium Channel Kv1.1; Chain A 26 156 IPR011333 -
Vian2g02913 642 SUPERFAMILY POZ domain 22 137 IPR011333 -
Vian2g02913 642 ProSiteProfiles NPH3 domain profile. 225 518 IPR027356 -
Vian2g02913 642 PANTHER OS12G0117600 PROTEIN 34 587 IPR043454 -
Vian2g02913 642 Coils Coil 554 588 - -
Vian2g02913 642 Pfam NPH3 family 225 494 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02913 Vian-Chr2 49860899 49864278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02913 1 468 EF-hand Containing Proteins AT2G47860 60.000 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02913 - - gmx:100776688 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02913 2 49860899 49864278 Vian2g02913 2 49860899 49864278 ECH
Vian2g02913 2 49860899 49864278 Vian3g01952 3 23351192 23355188 PCT