Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02838 ATGGCCATCACTACTCACACTCTATCCTCCACAGAAAAAAGACATTGGTGGCTTACCAATCGAAAGATTGTTGAGAAATACATCAAAGACGCTCGGAGTCTTATAGCCACGCAAGATCAGAGGGAGATTGTTTCGGCTCTCAACCTTCTCGATGCGGCTCTGGCGATTTCTCCCAGGCTGGACCAAGCGCTTGAGCTTAGAGCCAGGGCTCTGCTCTGTTTGCGGCGCTTCAAGGAGATCGCGGATATGCTTCAGGACTACATTCCGAGCCTCCGAATCAACGATGACTCCTCTTCCTCCTCCTCCTCTGTTTCATCCGACACCTCCAGAGAGGGAGTGAAGCTTCTCTCTTCCTGTGAGTCGCCGGTGAGAGATCAGATCTTCAAGTGCTTTTCTGTTTCCGACCTCAAGAAGAAGGTCATGGCAGGGCTGTGTAAAAACGGCGAGAAGGAAGGGCAATGGAGATACTTGGTGTTGGGTGAAGCATGCTGCCACCTAGGCCTAATGGAGGATGCAATGGTTCTTCTTCAAACGGGAAAGCGTCTTGCAAGCGCTACGCTCCGGCGCGAGAGTGTGTGCTGGTCGCAAGACAGCTTCAATGTTGCGAACATCCAATTCTCCAGCGACGCCACAAATGCGCCACCCACAACTCCACCGCGAACTCTTCTTGCGGCGGATACTGAGAGCGTGACTCAACTCCTCGGCCACATAAAGTTCCTCCTCCGGCGACGCGCCGCCGCACTGGCCGCCCTCGATGCAGGGCTCTACTCAGAGGCCATCCGCCACTTCTCGAAAATTGTGGACGGCCGGCGTAGCGCACCGCAGAGCTTCCTTGTCGAATGCTACCTCCTCCGCGCCTCTGCTCACCGTTCCGCCGGTAGAATTGCAGAGTCAATTGCGGATTGTAACCGCACCCTTGCTTTGGACCCCACTTGCATTCAAGCACTAGAAACCAGAGCTTCACTCTTCGAAAACATTCGTTGTTTACCCGATTCTCTTCACGACCTCGAACACTTGAAGCTCCTCTACAATTCAATTTTACGAGACCGCAAGCTTCCCGGTCCTGCGTGGAAGCGCCACAACGTGCGTTATAGGGAAATTCCAGGGAAACTCTGCACCCTCACTATTAAAATTCAAGAACTGAAACAGAAGCTGGCATCTCGAGAAACAGGGAATGTCGATTACTATGCTTTGATTGGTGTTCGACGAGGTTGTTCCCGGTCGGAGTTGGAAAGGGCTCACTTGTTGCTTTCCTTGCGGCACAAGCCTGATAAGGCAACGGGGTTTATCGAAAGGTGCGAGCTTGCGGATGAGCGTGATGTTGAGTCGGTTAATGAGAGGGCGAAGATGTCATCTTTGTTGTTGTATAGATTGGTTCAGAAGGGTTACACTACTGTGATGAGTAACATCATGGATGAGGAAGCTGCTGAGAAGCAGAGAAAGAAGGCAGCTTTGCTGGCTATTCAAGTGCAGAAAGAGAAAGACGATGAACCTGAGCTGTGGAGCAAGGTTGAGTGTACTAGGAGCAGCAGCGTGGAAAATAATAATAATAATAAAAACGATGATAATAATAATAATAATGCTCAAATGTCTCAAAATAGTTCCATGGTGTGTTCTTCTACTGTGAATCCGGCGATGTTTCAGGGCGTTTTCTGCCGTGACATTGCAGTGGTGGGGAACTTGCTTTCTCAGGTGGGGTTTAATCGGTCCATGCCGGTGAAGTATGAAGCGTTGAGCTGTTGA 1743 0.506 MAITTHTLSSTEKRHWWLTNRKIVEKYIKDARSLIATQDQREIVSALNLLDAALAISPRLDQALELRARALLCLRRFKEIADMLQDYIPSLRINDDSSSSSSSVSSDTSREGVKLLSSCESPVRDQIFKCFSVSDLKKKVMAGLCKNGEKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRLASATLRRESVCWSQDSFNVANIQFSSDATNAPPTTPPRTLLAADTESVTQLLGHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRSAPQSFLVECYLLRASAHRSAGRIAESIADCNRTLALDPTCIQALETRASLFENIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLTIKIQELKQKLASRETGNVDYYALIGVRRGCSRSELERAHLLLSLRHKPDKATGFIERCELADERDVESVNERAKMSSLLLYRLVQKGYTTVMSNIMDEEAAEKQRKKAALLAIQVQKEKDDEPELWSKVECTRSSSVENNNNNKNDDNNNNNAQMSQNSSMVCSSTVNPAMFQGVFCRDIAVVGNLLSQVGFNRSMPVKYEALSC 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02838 580 PANTHER OS01G0273500 PROTEIN 8 580 - -
Vian2g02838 580 SMART tpr_5 279 312 IPR019734 GO:0005515
Vian2g02838 580 CDD DnaJ 394 428 IPR001623 -
Vian2g02838 580 Gene3D DnaJ domain 377 495 IPR036869 -
Vian2g02838 580 SUPERFAMILY Chaperone J-domain 388 428 IPR036869 -
Vian2g02838 580 MobiDBLite consensus disorder prediction 508 535 - -
Vian2g02838 580 SUPERFAMILY TPR-like 245 340 IPR011990 GO:0005515
Vian2g02838 580 Gene3D Tetratricopeptide repeat domain 205 352 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02838 Vian-Chr2 49265851 49268555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02838 - - vra:106757864 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02838 2 49265851 49268555 Vian2g02838 2 49265851 49268555 ECH
Vian2g02838 2 49265851 49268555 Vian3g01602 3 17595337 17597999 PCT