Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02807 ATGAATCACTACCCTCCACTGAAGGTGAAGTGGAAGGGTAACAAGAATAGCATTGGTTTTGGAGCTCATTCTGACCCTCAGATGTTGACCATCATGCGCTCCAACGATGTGGGTGGCCTTCAAATTTACACCCGTGAGGGCCTATGGCTTCCTGTTCCTCCTGATCCCACTAATTTCTTTGTCATGGTTGGCGATGTTTTGCAGGTTATGACAAATGGAAAGTTCATGAGCGTGAGGCACAGGGCATTGACGAATACGTCGGAGGCAAGGATGTCAATGATATACTTTGCAGCACCGCCACTTGATTGGTGGATAGCTCCTCTGCCGGAGATGGTGTCACCGCCGGAAAATGAAAGTGTGTATAAGGCCTTCACATGGGCCCAGTACAAGGAAGCAACATATTCTTTACGCCTTGGAGATTCACGGCTTGATCTCTTCAGGGCCCAGATAGATACCCATCTTCTCTCTTCCTCTCAATCTCAGTTTCAACGTTGA 495 0.4808 MNHYPPLKVKWKGNKNSIGFGAHSDPQMLTIMRSNDVGGLQIYTREGLWLPVPPDPTNFFVMVGDVLQVMTNGKFMSVRHRALTNTSEARMSMIYFAAPPLDWWIAPLPEMVSPPENESVYKAFTWAQYKEATYSLRLGDSRLDLFRAQIDTHLLSSSQSQFQR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02807 164 Gene3D - 1 156 IPR027443 -
Vian2g02807 164 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 1 99 IPR005123 -
Vian2g02807 164 Pfam 2OG-Fe(II) oxygenase superfamily 2 98 IPR044861 -
Vian2g02807 164 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 132 - -
Vian2g02807 164 SUPERFAMILY Clavaminate synthase-like 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02807 Vian-Chr2 48999379 48999969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02807 17 147 Glycosyltransferase AT5G59530 37.778 1.31e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02807 K04125 - gmx:100777233 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02807 2 48999379 48999969 Vian2g02807 2 48999379 48999969 ECH
Vian2g02807 2 48999379 48999969 Vian3g01568 3 17161448 17165022 PCT