Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02804 ATGGCCCCTGAGCTTGTACCCACCGTCACAAAATCCACTGCCTCCTTCACCAGCCCTACCACCCTGCCACCACGTGCTTATGTCACATTCCTTGCCGGAAATGGTGACTACGTAAAAGGGGTGGTTGGTCTTGCCAAAGGCTTGAGAAAGGTCAAAACAGCCTACCCACTGGTGGTGGCTGTCCTTCCTGACGTGCCAGAAGAGCACCGTAAGATTCTTAAATCTCAGGGCTGTATCGTCCGTGAGATTGAACCCGTTTACCCACCAGAAAATCAGACCCAGTTCGCTATGGCTTATTACGTCATCAACTATTCCAAGCTCCGTATATGGGAGTTTGTAGAATACAGTAAGATGATATACTTGGACGGAGACATTCAAGTGTTTGAGAATATAGACCACTTATTTGACCTACCTGACGGTCAGTTTTATGCTGTGATGGACTGTTTCTGCGAGAAGACATGGAGTCACACTCCTCAGTACAAGGTTGGGTATTGTCAGCAGTGTCCAGAAAAGGTGCAGTGGCCCACTGAATTGGGCCAGCCCCCTGCTCTTTATTTCAACGCCGGCATGTTCGTGTTTGAACCTAGCATGGCCACTTACCACGACTTACTGAAAAGGTTGAAAGTCACTACTCCCACATCGTTTGCAGAGCAGGACTTCTTGAACATGTACTTCAAGGACATTTATAAGCCAATTCCTCTGACCTACAACCTTGTTCTCGCCATGCTTTGGCGTCACCCAGAAAATGTTAACCTTGAGGAAGTCAAGGTTGTTCACTACTGTGCAGCGGGGTCAAAGCCTTGGAGATATACTGGAAAAGAAGAAAATATGCAGAGGGAGGACATAAAGATGCTGGTCCGTAAATGGTGGGATATCTACAACGATGCTTCGCTTGATTACAAGCCATTAGGAGCAAGTGAAGCTTCAGTAGATGGTGTTGACATGGAACCATTGGGACATCTATCAAAGGTTGTTCAACGTGTTCTTGCTGCACCTTCAGCAGCTTAG 1008 0.4722 MAPELVPTVTKSTASFTSPTTLPPRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRKILKSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGQFYAVMDCFCEKTWSHTPQYKVGYCQQCPEKVQWPTELGQPPALYFNAGMFVFEPSMATYHDLLKRLKVTTPTSFAEQDFLNMYFKDIYKPIPLTYNLVLAMLWRHPENVNLEEVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVRKWWDIYNDASLDYKPLGASEASVDGVDMEPLGHLSKVVQRVLAAPSAA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02804 335 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 301 IPR029044 -
Vian2g02804 335 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 300 IPR029044 -
Vian2g02804 335 FunFam Hexosyltransferase 23 301 - -
Vian2g02804 335 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Vian2g02804 335 CDD GT8_Glycogenin 25 296 - -
Vian2g02804 335 PANTHER GLYCOGENIN SUBFAMILY MEMBER 22 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02804 Vian-Chr2 48955388 48956608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02804 1 301 Glycosyltransferase AT1G56600 79.139 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02804 K18819 - gmx:100809287 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02804 2 48955388 48956608 Vian2g02804 2 48955388 48956608 ECH
Vian2g02804 2 48955388 48956608 Vian3g01468 3 16064350 16065601 ECH