Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian2g02781 | ATGAAATCACCTAATGTGAAAGAATTACTAGAGAATCCTCAATTTCTTCAAAGTGCCCTGAAGGGATCATCCAGAGTGAGTGCGATGGAAGATTTTGCTAACAGCTTTTGCGGTTGGAGTTGGGAGGAGAACAAGTTGTTCGAGCTAGCTTTGGCAGTGGTAGATGAGCAACACCCTGAACGGTGGGAAGTGGTTGCAGCCATGGTTGGAGGAGAAAAAAGTGCAGGAGATGTTCAAGAACATTACGTCATCCTTCTCCAGGATTTACTCGTTATAGAATCTGGAAAACTGGACCATAAACTTGGGGAAGTTATGCCTGTTGTCTTAGTTGAGAGCAAGGAGTCCATATGCTTCTCCCACGACGATTCAACCATGTAA | 378 | 0.4444 | MKSPNVKELLENPQFLQSALKGSSRVSAMEDFANSFCGWSWEENKLFELALAVVDEQHPERWEVVAAMVGGEKSAGDVQEHYVILLQDLLVIESGKLDHKLGEVMPVVLVESKESICFSHDDSTM | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian2g02781 | 125 | Gene3D | - | 38 | 85 | - | - | |
| Vian2g02781 | 125 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 31 | 97 | IPR044636 | GO:0003700 | |
| Vian2g02781 | 125 | FunFam | Transcription factor SRM1 | 32 | 99 | - | - | |
| Vian2g02781 | 125 | SUPERFAMILY | Homeodomain-like | 39 | 94 | IPR009057 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian2g02781 | Vian-Chr2 | 48759423 | 48759800 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian2g02781 | - | - | var:108327847 | 252.677 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vian2g02781 | 2 | 48759423 | 48759800 | Vian3g01548 | 3 | 16923472 | 16923771 | PCT |