Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02771 ATGACATCTTCATTATTTTCCATTCTTCCTTCCACCGTATTATTTTTCTCTTTTGCTATTATCTTCTCTGCACCTTATGGAGCTGAAGCATGGTTGAAGCCCAAAATACCCATCTCTTCTCTCATCACAAAAACTCTTTTTGACTCATTTTTCCTACACAAAGATGACACTGCATGCCCTGCTAAAGACTTCTACAGCTACGACTCCTTCATTCTTGCATCAAAATCCTTCCCTGCATTTGGTACCACTGGTTGTTTAGCCACGCGCAAGCGTGAGATTGCTGCGTTTCTCGCTCAGATTTCCCATGAAACCACCGGTGGGTGGGCCACTGCACCCGATGGCCCATTTGCTTGGGGCTTGTGCTTCAAGGAAGAAATTAGTCCTCAGAGTAACTACTGTGATTCCACTAACTCTCAATGGCCATGCTTCCCTGCCAAAAGTTACAAGGGAAGAGGACCGATTCAACTTTCTTGGAACTACAACTATGGACCAGCAGGGAAGGCGTTGGGATTTGATGGGTTGAAGAATCCGGAGATTGTGGCGAACAATTCCGTGATAGCCTTCAAAACTGGGCTCTGGTTTTGGATGACAGAGCAAAAGCCAAAACCTTCTTGCCACGACGTGATGGTTGGGAAATACGTGCCTACAGAAGCTGACATAGCGGCTAATCGAACAGCTGGTTATGGCTTGCTGACTAACATAATCAACGGTAAACTTGAATGTGGGATTCCTGGTGATGCAAGAGTCAATGATCGGATTGGTTTTTTCCAAAGATATACAAAGCTCTTCAACGTCGACACTGGACCTAACTTGGATTGTGCATATCAGCAACCCTTCTAA 840 0.4512 MTSSLFSILPSTVLFFSFAIIFSAPYGAEAWLKPKIPISSLITKTLFDSFFLHKDDTACPAKDFYSYDSFILASKSFPAFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFAWGLCFKEEISPQSNYCDSTNSQWPCFPAKSYKGRGPIQLSWNYNYGPAGKALGFDGLKNPEIVANNSVIAFKTGLWFWMTEQKPKPSCHDVMVGKYVPTEADIAANRTAGYGLLTNIINGKLECGIPGDARVNDRIGFFQRYTKLFNVDTGPNLDCAYQQPF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02771 279 CDD chitinase_GH19 42 273 - -
Vian2g02771 279 Pfam Chitinase class I 41 273 IPR000726 GO:0004568|GO:0006032|GO:0016998
Vian2g02771 279 FunFam Endochitinase (Chitinase) 124 182 - -
Vian2g02771 279 PIRSF Endochitinase 19 279 IPR016283 GO:0004568|GO:0005975
Vian2g02771 279 Gene3D - 45 279 - -
Vian2g02771 279 ProSitePatterns Chitinases family 19 signature 1. 59 81 IPR000726 GO:0004568|GO:0006032|GO:0016998
Vian2g02771 279 PANTHER CHITINASE-RELATED 37 277 - -
Vian2g02771 279 Gene3D Endochitinase, domain 2 124 182 - -
Vian2g02771 279 SUPERFAMILY Lysozyme-like 38 279 IPR023346 -
Vian2g02771 279 ProSitePatterns Chitinases family 19 signature 2. 186 196 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02771 Vian-Chr2 48664129 48665052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02771 37 279 Glycoside Hydrolase AT4G01700 74.486 9.74e-146 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02771 - - gmx:100784196 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02771 2 48664129 48665052 Vian3g01534 3 16736628 16738102 PCT