Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02725 ATGACACCCAACATCACCACCGTCACTGTCAATGGCACCACTGAGCAAACCAAAAGTGGTAGTAGCCGTGCCTTTGTGACCTTCCTTGCTGGGAATGGTGATTACGTAAAAGGTGTTGTGGGTTTGGCCAAAGGGTTGAGAAAGGCCAAAAGCATGTACCCTTTGGTGGTGGCTGTGTTACCTGATGTTCCTGAGGAACATCGTGAGATTTTGAAATCCCAAGGTTGCACTGTCAGGGAGATTGAACCTGTGTATCCACCTGAGAATCAGACACAGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTACGTATCTGGGAGTTTGTGGAGTACAGAAAGATGATATACCTAGATGGTGACATCCAGGTTTTTGAAAACATTGACCACTTGTTTGATCTTCCTGATAACTATTTCTATGCGGTCATGGATTGTTTCTGCGAGAAGACTTGGAGCCACAGCCCTCAGTACAAGATTGGTTACTGCCAACAGTGCCCTGATAAAGTTCAGTGGCCCTCTCATTTGGGTCCTAAACCTCCTCTATATTTCAACGCTGGCATGTTTGTCTATGAGCCTAATCTTGTCACTTACAGTGATCTTCTTCAAACTCTTCAAATCACCAAGCCCACTTCTTTTGCCGAGCAGGACTTTCTGAATATGTACTTCAAGGACAAGTACAAGCCTATACCAAACTTGTACAACCTTGTACTGGCCATGTTGTGGCGTCACCCCGAGAATGTTGAACTCGACAAAGTTCAAGTGGTTCATTATTGTGCTGCTGGGTCTAAGCCTTGGAGATTCACTGGGAAGGAGCAGAACATGGAGAGGGAAGATATCAAGATACTTGTGAAGAAGTGGTGGGAGATATACGAAGATGAGACACTAGACTACAATAACGACAACTCTGTCAATGTGGAACCTTTCTCTTCAGCACTGTCGGAGCCTGATGTTGTTCCACTCGTTTCGGCACCTTCTGCTGCATAA 987 0.4519 MTPNITTVTVNGTTEQTKSGSSRAFVTFLAGNGDYVKGVVGLAKGLRKAKSMYPLVVAVLPDVPEEHREILKSQGCTVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYRKMIYLDGDIQVFENIDHLFDLPDNYFYAVMDCFCEKTWSHSPQYKIGYCQQCPDKVQWPSHLGPKPPLYFNAGMFVYEPNLVTYSDLLQTLQITKPTSFAEQDFLNMYFKDKYKPIPNLYNLVLAMLWRHPENVELDKVQVVHYCAAGSKPWRFTGKEQNMEREDIKILVKKWWEIYEDETLDYNNDNSVNVEPFSSALSEPDVVPLVSAPSAA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02725 328 FunFam Hexosyltransferase 21 299 - -
Vian2g02725 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 20 297 IPR029044 -
Vian2g02725 328 Pfam Glycosyl transferase family 8 27 268 IPR002495 GO:0016757
Vian2g02725 328 CDD GT8_Glycogenin 23 293 - -
Vian2g02725 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 15 292 - -
Vian2g02725 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 295 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02725 Vian-Chr2 48170225 48172526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02725 1 328 Glycosyltransferase AT1G56600 74.702 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02725 K18819 - gmx:100800249 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02725 2 48170225 48172526 Vian2g02725 2 48170225 48172526 ECH
Vian2g02725 2 48170225 48172526 Vian3g01468 3 16064350 16065601 PCT