Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02642 ATGGTGTCGAAGAAGAGGGTAGATTATGGATTTAATGGCTTTCGAGTTCCTATTATACCTAAAGCTCCTAGATCTGCAAGGAGGAGGGGTCCTTTCAACAAAGCAGCAGAGGATGGTCGAGTTTGTGCTATCGAACTACTGGCATCTTTAGCTGGCCAATTGCTGCAGGAGAGTGAAAGTTCTGCTTCCAGCAACGCATCTGAAGGAAATAATCAACCTGCCTTTAGCCAAGGTGTCATTGAGCAAGACAGACAAAATGAAGTTAAACCATTAAAAAAGGAGGAAATTCACCAGGGAAGTTGTGCTGAGAGCACTATTAAGACTGAGGTAGGGTCACAAAACAGTAGCCAGAAACCTCCTCCACATTCCAAGACTGATTTTTCAAAAGGGCACGTTTCGGTTAATAATGGTTCTGACATTTGGGAGAAAGTTGAAGGTGATGTGAAGTCTGAAATTTTCAAATGGGATAATAAATTTGGGAATTATTCTAATAGATTAGTAAAAGCATCTGAAAAGTTTAGGGAGTCTAGTGATGGTAAGATGAAGAATGGATTTAAACAGGAACAAAAAGCTGGCAGTTCATGCTTTAGGGGATCAAATTTGGCTGATAAATGTAGTTTGAAAGACCACTTAGAATTGCGTGGGAATGTTGTTAAATTAGGTTCTAGAGATGATGACGAAAACTTTTTAAGGTGCAAAAGAGTTTGCACAAAGTCAAAGGCTTTTAGGTCTCCAAGACGCATTGCGCACCGAAGAATCAGGAATTTGATGTCTTCTAAATACTGGAAGACTGCCCCAAAGCTGAAAGACTGTGAACTTTCTAGATCTGATTTAGGAGTACCTCATTATCATAAGAGGAAGACTTGCTATGGTTTTGAAAGATTTCAGAACAACACTTTTATTAAGAAGAGGAAAATCGTTGATCGGGTTTCAGGAGTAACTTCTGATGGAGGATTCAGCAGTGAGAGTGTGTCCAATTCACCTCAGAAAGGGACGGATGGAGACAAGCCTAGCTCATCTGCAAAACTGCATGTAGCTAAGGCTAAGGATTCCCATGTAAAGTTTAGCATTAAGTCGATAAGGATACCAGAGCTTTATATTGAGGTTCCCGAAACTGCAACTGTTGGTTCGCTAAAGAGGACAATCATGGAGGCGGTGATGGCTATACTTGGAGGGGGTGCACATGTTGGTGTTCTTCATCATGGGAAAAAAGTCAGAGATGACAGTAGGACGCTTGTGCAGACGGGTATATCTTGCAACGAAAATTTGGATACCCTGAGTTTCATGTTGGAGCCCGTTTCTCTTCAAGCTCCAACCATTTGTGCTGGTGATCCCTCTTCTCAATGTGAAACATCCCAGCTCACTAGGCCCATAGAAACTCCTGCCTTAGATTCAGACATTACTGATACCTTGCATGACTCACCCTTGCTGACATATCCGAGCAACCTAATTGAAAGTAACCACGAGACTACTTCTTCACTCGCCGACACAACAGTTGACAAAATAACACCTGATTGCAGAGCGCTGGTTCCCGTCCCAGCTAGCGCGGAAGCATTAGCTGTGGTTCCTGTGAGTCAGAAAACTAAGCGCTCTGAGTTTGTACAGCGCCGAACCAGGAGACCGTTCTCTGTGACTGAGGTAGAAGCACTTGTTCACGCAGTTGAGGAACTTGGAACTGGGAGGTGGCGTGATGTTAAGCTGCGAGCTTTTGAGAATGCAGACCATAGGACATATGTGGACCTAAAGGATAAATGGAAAACATTGGTGCACACTGCAACAATCTCCCCTCAACAAAGGAGAGGAGAACCGGTGCCTCAGGAGCTCTTGGACAGAGTTTTGGCTGCTCATGCATTCTGGTCTCAGCACCAAGCCAAGCAGCATGGGAAACATCAAGCTGGATCTGGAACCTTGAAGATTACTGAAGCCTCGGCTGAAAGACCGTGTGTTTGTTGA 1953 0.4383 MVSKKRVDYGFNGFRVPIIPKAPRSARRRGPFNKAAEDGRVCAIELLASLAGQLLQESESSASSNASEGNNQPAFSQGVIEQDRQNEVKPLKKEEIHQGSCAESTIKTEVGSQNSSQKPPPHSKTDFSKGHVSVNNGSDIWEKVEGDVKSEIFKWDNKFGNYSNRLVKASEKFRESSDGKMKNGFKQEQKAGSSCFRGSNLADKCSLKDHLELRGNVVKLGSRDDDENFLRCKRVCTKSKAFRSPRRIAHRRIRNLMSSKYWKTAPKLKDCELSRSDLGVPHYHKRKTCYGFERFQNNTFIKKRKIVDRVSGVTSDGGFSSESVSNSPQKGTDGDKPSSSAKLHVAKAKDSHVKFSIKSIRIPELYIEVPETATVGSLKRTIMEAVMAILGGGAHVGVLHHGKKVRDDSRTLVQTGISCNENLDTLSFMLEPVSLQAPTICAGDPSSQCETSQLTRPIETPALDSDITDTLHDSPLLTYPSNLIESNHETTSSLADTTVDKITPDCRALVPVPASAEALAVVPVSQKTKRSEFVQRRTRRPFSVTEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTATISPQQRRGEPVPQELLDRVLAAHAFWSQHQAKQHGKHQAGSGTLKITEASAERPCVC 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02642 650 MobiDBLite consensus disorder prediction 101 132 - -
Vian2g02642 650 SUPERFAMILY Homeodomain-like 540 621 IPR009057 -
Vian2g02642 650 MobiDBLite consensus disorder prediction 315 341 - -
Vian2g02642 650 MobiDBLite consensus disorder prediction 315 336 - -
Vian2g02642 650 CDD SANT_TRF 540 590 - -
Vian2g02642 650 ProSiteProfiles Myb-like domain profile. 534 589 IPR001005 -
Vian2g02642 650 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 631 IPR031105 -
Vian2g02642 650 Gene3D - 527 631 - -
Vian2g02642 650 MobiDBLite consensus disorder prediction 85 100 - -
Vian2g02642 650 FunFam Telomere repeat-binding protein 1 528 631 - -
Vian2g02642 650 MobiDBLite consensus disorder prediction 58 132 - -
Vian2g02642 650 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 535 593 IPR017930 -
Vian2g02642 650 SMART sant 538 591 IPR001005 -
Vian2g02642 650 MobiDBLite consensus disorder prediction 58 83 - -
Vian2g02642 650 SUPERFAMILY Ubiquitin-like 349 425 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02642 Vian-Chr2 47192351 47195231 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02642 - - gmx:100795471 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00380 11 3529030 3532879 Vian2g02642 2 47192351 47195231 ECH
Vian2g02642 2 47192351 47195231 Vian2g02642 2 47192351 47195231 ECH