Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02623 ATGTGTCAGACTCGCTTGGAACTTTGTCATGAGTCTTCTCTTAAAGCATCCAGAGTATCTTTTATCCCTGAAAGACTTGGTGATATTGTTATACTCTTCATAAGGTTTGGCATACTTGTGTGCCTTGTTGCCTCCATATCACTCGCTCTCCACTCAGCATTTGCTAAACCAGACCGATGGTTCCCCTTACCGGAGCATATACATACTGTACAGAATACTTCTGTCATTGACAGCGCACCAACAAACATCTCACATATTCTGTTTGGCATTGGTGGGTCATCTAACACTTGGCATGACCGCAGCAACTACAGCAAACTATGGTGGAATCCAAACACCACAAGAGGTTTTGTTTGGCTTGACAAGAAGCCTAAGATTCTGCGTGATGACATGCTAGTGCCATATCAAATCTCAAAGGGCTGGAAGCGGTTCCAGTATGTGCATTCAGCATCTGCAGTTCGGATTTCCCGGATAGTTCATGAGAGCTTTAAACTTGGTTTGCCAAATGTTAGGTGGTTTGTAATGGGAGATGATGATACTGTGTTCTTTACTGAGAACTTAGTTACTGTGTTGAGAAAATATGATCACAACCAGATGTATTATATTGGTGGGAGTTCTGAGAGTGTTGAGCAAGATTTGATGCATTCTTATGACATGGCATTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCTGCTCAACTAGCCAAAATAATGGATGGTTGTCTAAGCAGATACTACTACTTTTATGGTTCTGATCAAAGGGTTTGGGCCTGTGTGAATGAAATTGGGGTGCCTCTTACCAGAGAAGGTGGATTCCACCAGCTTGACATAAGAGGGGATCCATATGGTCTTCTAGCTGCACACCCTTTGGTACCACTTGTATCACTCCATCACCTTGACCAATTGAACTCCGTGTTTCCCAACCAGACTCAATTTCACTCAATGGAAAAGCTCATCAGTGCATACCACGTTGACCCTGCCCGGACAGTGCAGCAAAGTTTTTGCTATGATCATAAGCATAGATGGTCAATATCCATCTCATGGGGTTACACCATACAAATATATCCATTTTTGTTGATGGCATCAGACTTGCAGATGCCATTGCAGACATTTAGGACTTGGCGAAGTTGGAAAGACGGTCCCTTCACATTCAATACGAGACCAATGAGCTCTGACCCGTGTCAGAAGCCAGCTGTGTTTTTCCTGGATGAGGTTACAGAAGTGGGAAAAAGTGGAAGTGTCACTATCTACAAGAGACACGAAGGCAGTGAAGGGAAGTGCACGAGAGAAGGCATCAGTAACGTGGATTTGGAAAGCATTACAGTTTCTGCCTTGAAGCTGGACCCAGAATATTGGAAAAGTGTACTGCGCAGGCATTGCTGCCAACCATTGGCGGGTGGAAGCATAAACAATGGTAGTATGCATATCAGGATTAGGAAGTGCAGACCTCAAGAAACCATTACTATTTAG 1473 0.4372 MCQTRLELCHESSLKASRVSFIPERLGDIVILFIRFGILVCLVASISLALHSAFAKPDRWFPLPEHIHTVQNTSVIDSAPTNISHILFGIGGSSNTWHDRSNYSKLWWNPNTTRGFVWLDKKPKILRDDMLVPYQISKGWKRFQYVHSASAVRISRIVHESFKLGLPNVRWFVMGDDDTVFFTENLVTVLRKYDHNQMYYIGGSSESVEQDLMHSYDMAFGGGGFAISYALAAQLAKIMDGCLSRYYYFYGSDQRVWACVNEIGVPLTREGGFHQLDIRGDPYGLLAAHPLVPLVSLHHLDQLNSVFPNQTQFHSMEKLISAYHVDPARTVQQSFCYDHKHRWSISISWGYTIQIYPFLLMASDLQMPLQTFRTWRSWKDGPFTFNTRPMSSDPCQKPAVFFLDEVTEVGKSGSVTIYKRHEGSEGKCTREGISNVDLESITVSALKLDPEYWKSVLRRHCCQPLAGGSINNGSMHIRIRKCRPQETITI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02623 490 FunFam Fringe-related protein-like 73 324 - -
Vian2g02623 490 Pfam Protein of unknown function, DUF604 210 462 IPR006740 -
Vian2g02623 490 Gene3D - 76 341 - -
Vian2g02623 490 PANTHER FRINGE-RELATED 28 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02623 Vian-Chr2 46946135 46947973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02623 10 488 Glycosyltransferase AT3G11420 53.521 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02623 - - gmx:100802549 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02623 2 46946135 46947973 Vian2g02623 2 46946135 46947973 ECH
Vian2g02623 2 46946135 46947973 Vian2g01266 2 26117033 26119227 ECH