Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01266 ATGTCTTGTGCTGTGGACTCAGTTCGAGATCCTTTCAAAAACTCATGGAAAACCTTTCGTTTTCCCAACATCAAACCCACCGAACTTCTCTTTTTCTTCTTCAAAGCTGGTCTTGCAGCTTCAACCTTCTTCCTCATAACCCTAATTGTTCACCTTACACTATCCTACAACCAATACCATTACCATAACAACAACCACACATCCTTCAAATACGTGCTCCAACAACAGAAAACCACTCACCAACAACCACCCACCAACATCTCCCACCTCCTCTTCGGTATTGGCGGCTCCATCGCCACGTGGGACACGCGCCGCCAATACTCCGACGTTTGGTGGCGTAGTGGTGTCACCAGAGGCTTCGTGTGGCTGGACAGCCACCCATCTGGGAACGCGACGTGGCCCGAGACTTCACCGCCGTATAAGGTGTCCGGTGACACGTCGGCGTTCCAGTACACGTGCTCGTACGGGTCGCGATCCGCTATTCGTGTGGCGCGGATTGTGAAGGAGAGCTTCGAGCTGGGGGTGGAAAACGTGAGGTGGTTTGTAATGGGTGATGACGACACCGTTTTCTTCACCGACAACCTGGTTAAGGTGTTGTCGAAGTATGATCATAATGAAATGTACTACGTGGGTGGGAATTCTGAGAGTGTGGAACAGGATGTGATACACTTTTACACTATGGCGTTTGGTGGTGGTGGGTTTGCGATAAGTTACCCTTTGGCGAAGGAGTTGGCGAGAATTTTGGACGGTTGCATTGATCGTTACGCAGAGTTTTATGGGTCTGATCAGAAAATTCAGAGTTGTATCAGTGAGATTGGTGTTCAGGTCACCAAAGAACCAGGATTTCATCAGGTAGATATACGTGGGAACCCATATGGGTTGTTAGCGTCACATCCGGTGGCACCGTTGGTTTCCTTGCACCACTTGGATTATGTGGACCCGATATTTCCCGGCATGACCCGTGTTGACGCTGTTAAAAAACTGGTAACCGCCTACGAAACAGATACGGGTCGAACCCTACAGAAGAGCTTCTGTTACGACCTCAGACGAAACTGGTCCGTTTCGGTGTCGTGGGGTTACAGCGTTGAGATATACCCTTCTCTACGCACGGCCAAGGAACTAGAAACGGCGTTTCGGACTTTCCGCTCGTGGCGGAGCTGGAGTGATGGCCCGTTTACTTTCAATACCCGAACCCTTAGTTCCGACCCGTGTGAGAAACCAGTCGTGTATATGCTGGATCGGGTTCTCAGCTGGGACGTGGACAAGACCCGGTCTATCTATAGAAGGCACGAAGACTCACCGGGGAACGTGTGCACGCGTGATGACTACGCGCAGGCTTTAGACGTGCAATACGTGGACGTTTTTGCTTCACTGTTTACGGCGGATGTGTGGAAAAAGGCGCCACGTAGGCAGTGCTGCGAGGTAATGAAGGGCTCAGATAGAGTGAAGAATAATAGCGTGGTTGGCGTGAAGATCAGAGGGTGCCATCGATTCGAGAGTGTGACTCCTCTGTAG 1515 0.5083 MSCAVDSVRDPFKNSWKTFRFPNIKPTELLFFFFKAGLAASTFFLITLIVHLTLSYNQYHYHNNNHTSFKYVLQQQKTTHQQPPTNISHLLFGIGGSIATWDTRRQYSDVWWRSGVTRGFVWLDSHPSGNATWPETSPPYKVSGDTSAFQYTCSYGSRSAIRVARIVKESFELGVENVRWFVMGDDDTVFFTDNLVKVLSKYDHNEMYYVGGNSESVEQDVIHFYTMAFGGGGFAISYPLAKELARILDGCIDRYAEFYGSDQKIQSCISEIGVQVTKEPGFHQVDIRGNPYGLLASHPVAPLVSLHHLDYVDPIFPGMTRVDAVKKLVTAYETDTGRTLQKSFCYDLRRNWSVSVSWGYSVEIYPSLRTAKELETAFRTFRSWRSWSDGPFTFNTRTLSSDPCEKPVVYMLDRVLSWDVDKTRSIYRRHEDSPGNVCTRDDYAQALDVQYVDVFASLFTADVWKKAPRRQCCEVMKGSDRVKNNSVVGVKIRGCHRFESVTPL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01266 504 Gene3D - 77 325 - -
Vian2g01266 504 FunFam Fringe-related protein-like 76 333 - -
Vian2g01266 504 Pfam Protein of unknown function, DUF604 219 473 IPR006740 -
Vian2g01266 504 PANTHER FRINGE-RELATED 43 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01266 Vian-Chr2 26117033 26119227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01266 85 503 Glycosyltransferase AT2G37730 64.524 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01266 - - gmx:100813750 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01266 2 26117033 26119227 Vian2g01266 2 26117033 26119227 ECH
Vian2g02623 2 46946135 46947973 Vian2g01266 2 26117033 26119227 ECH