Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02305 ATGAATGTGGTGGGCAAAGTTGGAAGCTTGATAACCCAAGGTGTCTATTCAGTTGCGACCCCTTTTCATCCATTTGGTGGGGCGGTTGATGTCATTGTCGTTCAGCAGCAAGATGGCACGTTCCGCTGCACGCCGTGGTATGTTCGCTTTGGTAAGTTTCAAGGTGTCCTCAAAGGTGCTGAAAAGTTTGTTCGGATAAACGTCAATGGGGTTGAATCACACTTCCACATGTATCTTGACAATTCCGGGGAGGCTTATTTTGTAAAAGAGGTGGATGTTGATGGTGGTGATAATGGAATAAAGTCAAATGGGACTGCTGGTAATTCTGAGTGTAGTCAAGAAGACGGTGGTGTCGAAATTGATGAAAAAAATAATAGTTATCTGGGCATTGATGGTAGAGTTGGTCACAGATTTGACCATAGCATATCTGATTCAGGGGTGCGGTATCTTACTGGTGAAGGCCATTCCTCGGTTTTGTCACAACTTCAAAGGGCAGAATCTGATGTCGATAGGAGATTTTATGAGTTCCCAGATGATCAATCCTCTTTTGAAGGTTCACTTGATGTTTCGGAATATGATTCTACTAGATATGAGAATCTAGACGTGGATAATTTTATGGACTCACAGGGCTCCCATCCGGAGGTGGTTTTGGTCAGTGTTGATGGTCATGTATTGACGGCCCCTATCTCAGAATCGGAGCAGAATGAGGACAATGTTCAGTTAAAACATCCTCAATTTCATTTAGGCCCAGGTGAAGGGACTGACTTCTATGAGGGCAATGGGGAACTTATATCTGATGAAAATGCTTGGACTGCTGATTATGTTAGTCCGCCGGATGCTTCTAGTAGTTATGACACTAAGGTAGGTGATGATACTTCCGGGCTCTTGTTGGAAGCTCAAAGACAGGGGGAAATTAATTGTTGCACTGAGGAAACCTTAGTGATTCAAAATCAAGAAAATCATCTTTTGCAAACTGATTCAGAAGAGGCTGTATCTTGTATGAAGAGAGAGACTGTCTTCAAAAGTTGTTTGGAATTACGTGAGTTTACTCAGCAGGCTGGAAACGATGATTTACAAGATGTAGATTCTTCATTGGAGGTTCAAAATTCAGCAGAGGAATCCAATGCAAATATTTCAATTACTGATGAGAATAAAGACGAAAACATTCAGGTTGATATACAAGATAGAGATTCTTCACTGGAGGTTCGAAATATAGCAGAGAAATTCATTGCAAATGGTTCAATTACTGATGAAAATAAACAAGAAAACATCGATCAATGTAGAAAAAGTGACAGGTTATCTCCCCTTAGTGTGCCTTCTTCCTTTGATGACCACAGCTCTCCAGAATTAGAAGTAGAAGCTCAAGTGGTTGATAGAGATGCATCAGTGAAAGTTGACACTGGTTCTGGCAGTCATTCCGGTACTAAAGATGTTATTGAATGTAATAATGAACGTGTTGAGGAGTCAGTATCAAATGATCATGTAGATGATAGTGAACAAACTGCTACACTTGAAGATGGCAGTAAGAAAAGTGAACTTACTGAACCTCAAATTGTAACTTCCATTGATGAGGACCAATGTCATTCTGCTTTGAGATTTGAGGCCTCACTGTGTGGTCACGAACTTAAGGTGGGTATGGGTTTGGTTGCTGCTGCTGAGGTTTTTGAAGCACATCGGATATCTGCGGAGGAATTTAGAAGTTCAGCATCATCCATAATTAAGAATGAAAATCTGGTTTTGAAGTTCAGAGAGAGTTATCTGCGATGGGAAAAGGCTGCCCCTCTTGTCCTTGGAAAGACTGTATTTGGTTTAGACTTACCTGTTGATCCCAAAGATACAATTCCAGTGAGACAGGACGATACAGTAAAGGCTACAAATGAAGTTTCTGGACCAGCTTCGTCTGGACGCAGATGGAGACTTTGGCCTATTCCTTTTAGAAGAGTCAAGACAATTGAGCACACTGATAGTGAATCAAATGAGGATGTATTTGTAGATTCTGAGTCTGATTGGCAAACTTCTACTGTTGAACCTTCTCCAACATCTGCCAGGCATGAGTCTCCTCGCAAGCAATTCGTGAGGACAAATGTTCCATCGAATGAGATGATAGCATCCTTAAATCTCAAGGATGGTCAAAATTTGGTAACCTTCAGTTTCTCTTCCAGGGTTCTTGGAAGACAGCAGGTTGATGCTCATATTTACTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGATGTAGATGGAACTATTACCAAATCTGACGTTTTGGGGCAGGTCATGCCTTTGGTTGGCAGAGATTGGACACAGTCTGGAGTGGCAAGGCTTTTCTCAGCTATTAAAGAAAATGGATACCAGTTACTGTTTTTGAGTGCCCGTGCTATTGTCCAAGCTTATCTTACCAGGAACTTTTTGGTTAACTTGAAACAGGATGGCAAGAACTTACCCAATGGACCTGTTGTCATTTCTCCTGACGGATTATTTCCCTCTCTTTACCGAGAAGTAATAAGAAGGGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAACCCATTCTATGCTGGGTTTGGCAATAGAGACACTGATGAACTTAGTTACAGAAAGATGGGAATCCCAAAGGGCAAGATATTTATTATCAATCCCAAGGGTGAAGTCGCAACAAGTCACCGTATTGATTCAAAATCCTACACATCATTACACACACTCGTCAATGACATGTTCCCCCCCACTTCTCTGGTTGAGCAGGAGGATTTCAACTCATGGAATTATTGGAGAATGCCTTTTCCAGAAGTGGATTAG 2826 0.4133 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRCTPWYVRFGKFQGVLKGAEKFVRINVNGVESHFHMYLDNSGEAYFVKEVDVDGGDNGIKSNGTAGNSECSQEDGGVEIDEKNNSYLGIDGRVGHRFDHSISDSGVRYLTGEGHSSVLSQLQRAESDVDRRFYEFPDDQSSFEGSLDVSEYDSTRYENLDVDNFMDSQGSHPEVVLVSVDGHVLTAPISESEQNEDNVQLKHPQFHLGPGEGTDFYEGNGELISDENAWTADYVSPPDASSSYDTKVGDDTSGLLLEAQRQGEINCCTEETLVIQNQENHLLQTDSEEAVSCMKRETVFKSCLELREFTQQAGNDDLQDVDSSLEVQNSAEESNANISITDENKDENIQVDIQDRDSSLEVRNIAEKFIANGSITDENKQENIDQCRKSDRLSPLSVPSSFDDHSSPELEVEAQVVDRDASVKVDTGSGSHSGTKDVIECNNERVEESVSNDHVDDSEQTATLEDGSKKSELTEPQIVTSIDEDQCHSALRFEASLCGHELKVGMGLVAAAEVFEAHRISAEEFRSSASSIIKNENLVLKFRESYLRWEKAAPLVLGKTVFGLDLPVDPKDTIPVRQDDTVKATNEVSGPASSGRRWRLWPIPFRRVKTIEHTDSESNEDVFVDSESDWQTSTVEPSPTSARHESPRKQFVRTNVPSNEMIASLNLKDGQNLVTFSFSSRVLGRQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQVMPLVGRDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLVNLKQDGKNLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKMGIPKGKIFIINPKGEVATSHRIDSKSYTSLHTLVNDMFPPTSLVEQEDFNSWNYWRMPFPEVD 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02305 941 MobiDBLite consensus disorder prediction 656 688 - -
Vian2g02305 941 SMART lns2 741 897 IPR031315 -
Vian2g02305 941 MobiDBLite consensus disorder prediction 478 512 - -
Vian2g02305 941 MobiDBLite consensus disorder prediction 420 513 - -
Vian2g02305 941 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Vian2g02305 941 MobiDBLite consensus disorder prediction 665 681 - -
Vian2g02305 941 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 534 641 IPR031703 -
Vian2g02305 941 Pfam LNS2 (Lipin/Ned1/Smp2) 696 917 IPR013209 -
Vian2g02305 941 PANTHER LIPIN 1 941 IPR026058 -
Vian2g02305 941 SUPERFAMILY HAD-like 733 883 IPR036412 -
Vian2g02305 941 MobiDBLite consensus disorder prediction 446 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02305 Vian-Chr2 43447648 43454371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02305 K15728 - gmx:100780784 1511.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02305 2 43447648 43454371 Vian3g01701 3 19052430 19063739 PCT