Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02220 ATGTCCAACAACAACAAGGTGAAGGGTCTCCTGAAAGGTTTAAGATTCATTTCTCAGATGTTCGATGAGAAAGATTCAGACATTCAGATTGGTCATCCCACAGATGTAAAGCATCTAGCACACATTGGATGGGATGGCCAAGGTCCCTCTGACAATAACCCCACCTGGATGAACGAGTTTAAATCTGTCCCAGGGAATTCATCTGCATCTCACAGTCGTAAAGGAGACATTGATCATAGCAAAGAATCCAATAGTTCAATCCAAAGGGCCTCTGAAGATGAAGAGTTTTCTTTTGCAGATTCAATGGAAAGAAGTTCAAGATCTGTGAAAGGTGATGAGAGGCATTCGTTCGAGTCGGCAAAATCTAAACAACATTCAAATTCAACGGGGAATGTAAGAGAGTCTCAGGCAAAGGAAAAATCTGACAGACCAAGGCGTTCAAAAAAGTCATCAAAATCATCGCACCAACCGCATGATTCATGTCAAACATCGAAAGACACCGACCACGACATGCACACGGGTGATATTTCCCACCAACACGAAGACAGTGATTTGGCGCCTAGAAAGTCACGTCCCAAGATGTCAAAAGAGGGTTCCAATGTTGGTGGTGCCTCAAGCAGAGGAAGATCAAAATGCGAAGGCCATGGGAGACGTAGCTCCAAATTAGCTAACAAACATGAGTCTTTACAAGAAGATGGACACGTTGAGACAACAAAGTCTACAGAAGATACAGGAAAAAGTAACCTAAATGGACACTGA 759 0.4308 MSNNNKVKGLLKGLRFISQMFDEKDSDIQIGHPTDVKHLAHIGWDGQGPSDNNPTWMNEFKSVPGNSSASHSRKGDIDHSKESNSSIQRASEDEEFSFADSMERSSRSVKGDERHSFESAKSKQHSNSTGNVRESQAKEKSDRPRRSKKSSKSSHQPHDSCQTSKDTDHDMHTGDISHQHEDSDLAPRKSRPKMSKEGSNVGGASSRGRSKCEGHGRRSSKLANKHESLQEDGHVETTKSTEDTGKSNLNGH 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02220 252 MobiDBLite consensus disorder prediction 210 241 - -
Vian2g02220 252 MobiDBLite consensus disorder prediction 48 71 - -
Vian2g02220 252 Gene3D CRIB domain 24 74 IPR036936 -
Vian2g02220 252 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 5 213 IPR044510 -
Vian2g02220 252 MobiDBLite consensus disorder prediction 72 121 - -
Vian2g02220 252 MobiDBLite consensus disorder prediction 41 252 - -
Vian2g02220 252 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Vian2g02220 252 Pfam P21-Rho-binding domain 29 63 IPR000095 -
Vian2g02220 252 SMART PBD_5 30 63 IPR000095 -
Vian2g02220 252 CDD CRIB 28 62 - -
Vian2g02220 252 MobiDBLite consensus disorder prediction 153 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02220 Vian-Chr2 42297655 42298928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02220 - - gmx:102666244 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02220 2 42297655 42298928 Vian3g01740 3 19709551 19710451 PCT