Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02171 ATGGGAGATATGCAGAAAGATTATGATGTCAAACCCAGTTTTACACAGATCACCGTAGCCATTTCTGTGGGGTTGTTGTTTATCGTGGTCTTTCATTTTCGTCTGAAACAATCTAGAGATCGAAAGATCATCCCACGTATAAGATTATCACGCGCAAGCCACGTCCCAAAGCTTGAAAGATTCTCCCATTACGTAGCTAGGCAAATGGGATTCAAAGACAGAAGATTTTGTCCCCATCTATGTAGATTAGCTTCTGAATACATAAGGAAATACGAGGGACTTGAAGATGATATATACGCCTTTTTTGAGAATGAACCCGATGCCGATTCACTTTATGTGAAGCTGGTAGAGGAGTTTGAGAGATGCATTCTTAGTTACTTAGCATTTCATTGGAACTACGGTGACATAATTATGAGTCAGGTGTTGAGCTCGGAAAATGAGCCTAAAAAGAGGCTCAAGAACATAGTTATGGCAGCAACTAGGGAACAAAGGTTCGAGAGACTTGCCAAGAATCTGAAGGTGGCTAGAGTTTTTAATACCTTAGTGGAAGAAATGAAAGCGATGGGAATTGCTACAACCGATGATTCTCAATGCACAGAGGTGATGGCTCCAGTAGCTCATAGCGATAGGAGTCCAGTGCTTCTTTTAATGGGTGGAGGCATGGGAGCTGGCAAGAGCACCGTGCTCAAGGATATTCTCAAAGAACCATTTTGGGCAGGAGCATCCGGGAATGCCGTAGTCATTGAGGCAGATGCGTTCAAAGAATCAGATATGATCTACAAGGCCCTCAGCTCAAGAGGTCACCAAGACATGATTCAAACAGCAGAACTGGTACACCAATCATCCACAGATGCAGCCTCATCACTCTTAGTTACAGCATTGAATGAAGGACGAGATGTTATCATGGATGGCACACTGTCCTGGGTGCCGTTTGTTGTGCAGACAATCACAATGGCTAGGAATGTTCACCGTCGACGTTACCGCATGGGAGCTGGCTACAGGGTGAAGGATGATGGAACTGTAATTGAAAACTATTGGGAGAGAATTCAAGGCCAAGAGCCTGAACAAGTTGAAGGCAAAAAGCGAAAACCATATAGGATAGAGCTTGTTGGTGTAGTATGTGATGCTTATCTTGCAGTCGTTAGAGGCATAAGGAGAGCTATCATATGCAGAAGAGCAGTGAGAGTAAACTCACAGTTGAAATCACACAAGAGATTTGCTCAGGCATTTATGACTTACTGTCAACTAGTAGATAATGCACGACTATACTTCACAAATGCATTGGAAGGTCCACCCAAGTTGATAGGATGGAAAGATAGGGACAAGACACTGCTTGTTGATCCAGATGAATTCGACTGTTTGAAGAGGCTTGCCAAGTTGAACGAAAATGCGAACTCCATTTATGAACTTTACAAGCACCCCAACCCAGCTTGTGAAGCTGGATCGGTATGGAAAGACATCGTATTATCTCCTTCGAGGTTGAACATCCAACAGGAGCTCAAGTACTCAATCCAAAGAATTGAAAGCGTCAAATATAACTTCACCCTTGAGTCTTGA 1557 0.4329 MGDMQKDYDVKPSFTQITVAISVGLLFIVVFHFRLKQSRDRKIIPRIRLSRASHVPKLERFSHYVARQMGFKDRRFCPHLCRLASEYIRKYEGLEDDIYAFFENEPDADSLYVKLVEEFERCILSYLAFHWNYGDIIMSQVLSSENEPKKRLKNIVMAATREQRFERLAKNLKVARVFNTLVEEMKAMGIATTDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGASGNAVVIEADAFKESDMIYKALSSRGHQDMIQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGAGYRVKDDGTVIENYWERIQGQEPEQVEGKKRKPYRIELVGVVCDAYLAVVRGIRRAIICRRAVRVNSQLKSHKRFAQAFMTYCQLVDNARLYFTNALEGPPKLIGWKDRDKTLLVDPDEFDCLKRLAKLNENANSIYELYKHPNPACEAGSVWKDIVLSPSRLNIQQELKYSIQRIESVKYNFTLES 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02171 518 Pfam Zeta toxin 206 318 IPR010488 GO:0005524|GO:0016301
Vian2g02171 518 PANTHER UNCHARACTERIZED 5 512 IPR044802 -
Vian2g02171 518 Gene3D - 193 429 IPR027417 -
Vian2g02171 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 339 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02171 Vian-Chr2 41636690 41640469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02171 - - gmx:100794775 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02171 2 41636690 41640469 Vian2g02171 2 41636690 41640469 ECH
Vian2g02171 2 41636690 41640469 Vian3g01816 3 20792238 20796404 PCT