Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02141 ATGAGGAGTTTCTTCCCTGCAGAATCCTGTAAAGAGACGCATCCAAATACTTTGAATCCTCAGTCTTGGCTTCAAATTGAAAGAGGGAAACTTCCCAAGTTGTCATCGTACCCTTCCTCTGCCTCAATAGAATCTCTGGTCAAGGTCCCTCAGCCAGCTGTACGGCCTTTCTATAAGCCTGCTGATTATGTGGAAGTTTTGGCGCAAATCCATGAAGAGCTCGAGTCTTGTCCTCCACAAGAGCGGTCGAATCTGTTTTTGTTACAATACCAGGTCTTTAGGGGCCTTGGGGAAGTTAAACTGATGCGTAGAAGCCTTCAGGGAGCTTGGCAGAAAGCCAACACTGTTCATGAGAAGATTATATTTGGGGCATGGTTGAAATATGAGAAGCAAGAGGAAGAACTAATAGCCGACTTGCTTGCCAATTGTGGTAAATGTGCGAAGGAGTTTGCACCTGTAGATATAGCATCTCATCTTCCATTTGATGTAAATGTAAGTTCTGTGGGGAGAATGACCAATGAGAACTGCATTTCTCAAAATGTTACTTTTACAATTGGCGATGAAGAGATAGTTTGTGATAGACAAAAAATTTCTGAACTTTCGGCACCATTTAATGCTATGCTAAAGGGGTATTTCAGCGAATCACGTGCTGAGACTATAGATTTGTCTGAAAATAATATCTCTCCATTTGGTATGAAGGCAATAAGTATTTTCAGTTTGACTGGCGGTTTGATTGAGGTCCCCCCAAATCTTTTATTGGAGATATTAGCTTTTGCAAATAAGTATTGTTGTGAAAGACTTAAAGATGCTTGTGATAGAAGACTTGCATCCTTGGTTTCCTCCAAAGAAGATGCTGTAGAGCTCATGGAATATGCTCTTGATGAGAATTCAACTGTACTTGCTGCATCCTGTTTACAAGTACTTTTGCGTGATCTTCCAAACTGTTTGAATGACAGTCGGGTAGTAGAGATATTTGTTCATGCTAATAAGCAGCAGCTAGCAGTAATGGTTGGGCCAGGTATATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTTGTTCCGACAAAACAGTTCATATCCTGGAACGGTTAGTTGAGTTTGCTGAGAATGACAAACAGAGAATCCTGGCTTTACATCAATTGGGATGTGTAAGACTCTTACGGAAAGAATATGATGAAGCACGTCTTCTTTTTGAAGGGGCCGTAAACGCAGGCCATATATATTCTGTGGCAGGTTTAGCTAGGCTTGACTTTATAAAGGGCGACAAGTTTTTATCTTATGAGCTGCTGAGCTCGGTCATTTCATCTGTTACTCCACTTGGATGGATGTATCAGGAAAGGTCATTATACTGTGACAGTGACAAAAGGTGGGATGACCTTGAGAAAGCAAGTAATTTGGATCCTACACTTGCATATCCTTACATGTACAGGGCTGCCTCTTTGATGAGTACGCAGAATGCTCAAGCTGCACTAGCAGAAATCAATAGGATTCTTGGGTTCAAACTTTCACTAGAATGCTTAGAAATACGATTTTTTACCCATCTGACTCTTGAGGACTACAAAGCAGCTCTATGTGATGTTCAAACAATTCTTACTTTACGTTCAGATTATAGAATGTTTGAGGGACGTGTTGCTGCATCCCAACTCTGCACACTTGTGCGTGAGCATGTTGAACGTTGGACAACTGCTGATTGTTGGGCTCGGTTATATGACTGTTGGTCTGCAGTTGATGATATTGGGTCTCTGTCTGTTATATACCAGATGCTTGAATCTGATGCGGCAAAAGGTATTCTGTACTTCAGACAGTCATTGCTTCTCCTCAGGTATGTTATGAAATTTTTGAAGGCTCTTGGAGTCAGTGCTCAAGGACTTAGTTTTGCTAGAAATCATAGTAGGTCCAAACCTCCATATAACCCCTCCCCCGTCCCCCTAACAAAATGTTCTGATATTTGGTTGAACTGTCCTGAGGCTGCTATGCGGAGTTTACAGTTAGCTCAGCAACATGCATCAAGCGAGCATGAACGACTTGTATATGAGGGGTGGATCTTATATGATACAGGTCATTATGAGGAAGGACTCCAGAAAGCAGAGGAGTCTATTAGTATCAAAAGATCTTTTGAGGCATTTTTCCTGAAGGCCTATGCATTGGCTGACTCTAGCGTAGATCCATCATGCTCACCGATTGTTATCTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCACTGAACAATCTTGGAAGTGTTTATGTTGACTGCGGTAAATTGGACTTGGCTGCTGATTGTTATATCAATGCCCTTAAAATTCGACACACCAGAGCTCATCACGGTCTTGCGCGTGTTCATTGCCTCAAAAATGACAAGGCTGCTGCTTATATGGAAATGACCGAACTAATCAAGAAAGCAAAAAACAATGCATCGGCTTATGAGAAGAGGTCTGAGTATTGTGATCGTGAACAAGCAAAGGCAGATTTGGAGATGGTCACTAGATTAGATCCTCTTCGGGTGTATCCTTATAGATATCGTGCTGCAGTATTGATGGACAACCACAAGGAAGAGGAAGCCATAGCCGAACTCTCGAGAGCAATTGCATTTAAAGCTGATTTGCACCTCTTGCATCTACGTGCAGCATTTCATGAACACAAAGAGGACGTGTTAGGTGCGCTAAGAGATTGTCGTGCTGCGCTCTCAGTGGATCCAAACCACCAAGAAATGTTGGAACTTCATAATCGAGTCAATAGACACGAGCCGATGCGCTTAATTGATTTTGAATCTGGGCTTTTGTTGGATGGTGGAGAATATGGATATAAAAAAGGGTCTCTGATTCCGCTTTTGGTGACGGCCACTGTTAGGTTTGGTCTTGGTGAAACCACTGCTTCTGTAGTTGCCAATGCAGCTGCTGGCTTGGATGAAAATGGAGACTCAGAGAGGGAACAATGA 2976 0.4224 MRSFFPAESCKETHPNTLNPQSWLQIERGKLPKLSSYPSSASIESLVKVPQPAVRPFYKPADYVEVLAQIHEELESCPPQERSNLFLLQYQVFRGLGEVKLMRRSLQGAWQKANTVHEKIIFGAWLKYEKQEEELIADLLANCGKCAKEFAPVDIASHLPFDVNVSSVGRMTNENCISQNVTFTIGDEEIVCDRQKISELSAPFNAMLKGYFSESRAETIDLSENNISPFGMKAISIFSLTGGLIEVPPNLLLEILAFANKYCCERLKDACDRRLASLVSSKEDAVELMEYALDENSTVLAASCLQVLLRDLPNCLNDSRVVEIFVHANKQQLAVMVGPGIFALFCFLSEVSMNLNSCSDKTVHILERLVEFAENDKQRILALHQLGCVRLLRKEYDEARLLFEGAVNAGHIYSVAGLARLDFIKGDKFLSYELLSSVISSVTPLGWMYQERSLYCDSDKRWDDLEKASNLDPTLAYPYMYRAASLMSTQNAQAALAEINRILGFKLSLECLEIRFFTHLTLEDYKAALCDVQTILTLRSDYRMFEGRVAASQLCTLVREHVERWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGILYFRQSLLLLRYVMKFLKALGVSAQGLSFARNHSRSKPPYNPSPVPLTKCSDIWLNCPEAAMRSLQLAQQHASSEHERLVYEGWILYDTGHYEEGLQKAEESISIKRSFEAFFLKAYALADSSVDPSCSPIVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHHGLARVHCLKNDKAAAYMEMTELIKKAKNNASAYEKRSEYCDREQAKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKEDVLGALRDCRAALSVDPNHQEMLELHNRVNRHEPMRLIDFESGLLLDGGEYGYKKGSLIPLLVTATVRFGLGETTASVVANAAAGLDENGDSEREQ 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02141 991 SUPERFAMILY TPR-like 360 503 IPR011990 GO:0005515
Vian2g02141 991 SUPERFAMILY TPR-like 460 822 IPR011990 GO:0005515
Vian2g02141 991 Gene3D Potassium Channel Kv1.1; Chain A 170 319 IPR011333 -
Vian2g02141 991 SUPERFAMILY TPR-like 735 920 IPR011990 GO:0005515
Vian2g02141 991 SMART tpr_5 881 914 IPR019734 GO:0005515
Vian2g02141 991 SMART tpr_5 380 413 IPR019734 GO:0005515
Vian2g02141 991 SMART tpr_5 678 711 IPR019734 GO:0005515
Vian2g02141 991 SMART tpr_5 752 785 IPR019734 GO:0005515
Vian2g02141 991 Gene3D Tetratricopeptide repeat domain 357 546 IPR011990 GO:0005515
Vian2g02141 991 Gene3D Tetratricopeptide repeat domain 829 928 IPR011990 GO:0005515
Vian2g02141 991 Coils Coil 804 824 - -
Vian2g02141 991 PANTHER ETO1-RELATED 1 928 IPR044631 GO:0010105
Vian2g02141 991 SUPERFAMILY POZ domain 178 275 IPR011333 -
Vian2g02141 991 ProSiteProfiles TPR repeat profile. 752 785 IPR019734 GO:0005515
Vian2g02141 991 Gene3D Tetratricopeptide repeat domain 656 828 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02141 Vian-Chr2 41292383 41303804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02141 - - gmx:100793740 1628.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02141 2 41292383 41303804 Vian3g01857 3 21502618 21506109 PCT