Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02128 ATGGCACCCAGAAGGATTAAGATGCTGCTAAGGTTGTGCCTTGTGGTGGCTCTTTGGGGTGGCACATTGGCTCAATCTCAATCAAGTTGCACCAATGTCTTCATAAGTCTTGCTCCCTGCCTTGACTATGTAACAGGAAATGCCTCAAACCCTTCTTCTTCTTGCTGCTCTCAACTTGCCTATGTGGTGAGTTCTCAACCACTGTGCCTGTGTGAGGTTGTTAGCGGTGCTGCTTCAACAATTGCTGCAAGTTTCAACATCAATCAGACTCGGGCTTTGGCTCTCCCCACTTCTTGCAACATTCAGACACCTCCTCTTACCACCTGCACTGGCTCAGCCTCTTCCTCACCAGCTTTTTCCGTTTCAAACTTTCCCAACTCCCCTTCAGTTGATTTGACCGAGTACCTTTTTGGCACAGGGATTGGATCCAACACTGTTTCATCAGCGACCGGAAGCAGTACGATTGTCGGTGGTTCATCTCACGGAAATTCAAGTTCCACTTATAAATTATCATGTTCTTGGTTTCTGATGTTTGTCCTTGCAACCACTTTGACTTTCACCTTCACGAGTACCACATCGCTCTACATCTTCTAA 594 0.468 MAPRRIKMLLRLCLVVALWGGTLAQSQSSCTNVFISLAPCLDYVTGNASNPSSSCCSQLAYVVSSQPLCLCEVVSGAASTIAASFNINQTRALALPTSCNIQTPPLTTCTGSASSSPAFSVSNFPNSPSVDLTEYLFGTGIGSNTVSSATGSSTIVGGSSHGNSSSTYKLSCSWFLMFVLATTLTFTFTSTTSLYIF 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02128 197 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Vian2g02128 197 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
Vian2g02128 197 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Vian2g02128 197 Gene3D - 27 107 IPR036312 -
Vian2g02128 197 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 15 150 IPR043325 -
Vian2g02128 197 CDD AAI_LTSS 37 101 - -
Vian2g02128 197 Pfam Probable lipid transfer 24 109 IPR016140 -
Vian2g02128 197 SMART aai_6 30 109 IPR016140 -
Vian2g02128 197 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 110 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02128 Vian-Chr2 41146281 41147116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02128 5 152 Lipid Metabolism Gene Families AT3G22600 43.226 1.42e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02128 - - gmx:100789510 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02128 2 41146281 41147116 Vian2g02128 2 41146281 41147116 ECH
Vian3g01871 3 21739632 21740446 Vian2g02128 2 41146281 41147116 PCT