Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02091 ATGTCAGTGGCACCAGTTGAAAGTATTCCCGCATTAAGCAGTGATGTCTTCTATGATATATTTCGTCGACTTGATGGTGCAACATTGGCCAGTGCAGCATGTACTTGTGCAACGTTGTGTTCCATCTCTAAAGAAGAGAGTTTATGGGAGAACGTATGTTCATCTATGTGGCCTTCAACCAACAGAGAGGATGTCAAAAGTTTGATATCTTCTATCGGTGGATTCCGGAAATTTTATGCAGACTGTTTCCCGATTGTTGTAAACAAGGAGGTTGTAGAGTATCAACCGAACAACTATCATGAGTACCCAGACAATTGGACCGAAGCTGAGTATTACGGAGACATGAATGAATCGGAAAACATCTGTCCATCAGATTTTGTTTCTATAATAGATATTAGGTTCAAGGGAAAACCGGTCTGTTCCAAAGTTCTTTGGGGAATCCCAAATGCAAATAGCTATGATGGCTGGTTCTATAATTGCCCTTTCCGGATTGATTTTCTCACTTATGCAGATAGAGATGATAACAACGATGGATCTGTTCATCTTTCTGTATCTGATGGTCTGCCACGTGTGACATCCATGGAGAGGGAAAGGAAAGATGGGAAGCTGTGGCGGGAGCTCTGCGAAGGGCTCCAGCTCAGTTGGATTATAGTAAACAAGAAAATGAAACAAGCTGCAAATCTTGCTAGCTGGAGCCCTCTTGGTGGGCAACGACACTGGCCAACAGATAGGGATTTTGTCATCCGCTTTGGATCAGTTCTGCCTGCCAAGGACATTCTTCCTTGTCAAGTAGTGGAGTGTATCCTAATTATGAAGTTTAGAGTGGTTCACACCGAAGAAGAAGGGGTCCAAACAAGCCTTAAATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCATATACTTAAGGATGCACTTAGCAGCAGAAGGAGCAAAAACTACGGCGAAGTACTTGAGTCTTGCCACATGTATTCAAAAGTACAGAATGAGTTGAAAGAGGAGAAGATGAGAAACGAAAGTAGGTTGGATAGACTTTGTATTCTGAGTGGCATTGCGGCGTTTATGACGTTCTGGTACTGCGTTTTATAA 1122 0.4269 MSVAPVESIPALSSDVFYDIFRRLDGATLASAACTCATLCSISKEESLWENVCSSMWPSTNREDVKSLISSIGGFRKFYADCFPIVVNKEVVEYQPNNYHEYPDNWTEAEYYGDMNESENICPSDFVSIIDIRFKGKPVCSKVLWGIPNANSYDGWFYNCPFRIDFLTYADRDDNNDGSVHLSVSDGLPRVTSMERERKDGKLWRELCEGLQLSWIIVNKKMKQAANLASWSPLGGQRHWPTDRDFVIRFGSVLPAKDILPCQVVECILIMKFRVVHTEEEGVQTSLKLTELSMQLEDMEGAHVNGRNSLHILKDALSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02091 373 PANTHER F-BOX PROTEIN-RELATED 6 370 IPR045283 -
Vian2g02091 373 Gene3D - 4 106 - -
Vian2g02091 373 SUPERFAMILY F-box domain 6 79 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02091 Vian-Chr2 40653659 40654780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02091 - - gmx:100500689 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02091 2 40653659 40654780 Vian2g02091 2 40653659 40654780 ECH
Vian2g02091 2 40653659 40654780 Vian3g01399 3 15380654 15383248 PCT