Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02067 ATGGCGGCTGTCCCAGTATCGCGGACCGATCCACCGGCAATGGTGCCGCCGCCGCTCATCGTTTCCGACTCCTTCGCCAAGGACGCCATTCTCGCCTGGTTTCGCGGCGAATTCGCTGCAGCCAACGCGATCATCGACGCGCTCTGCGGCCACCTAGCCAGCATCGCTACTGCCTCCTCCGACTACGAAGCCACCTTCACAGCCATCCACCACCGCCGAATCAACTGGATCCCTATCATCCAGATGCAGAAGTATCATTCCATTGCTGATGTCGCTCTCGAGCTCCGCAAAGTTGTGGACAGTAAAACTGAGGCTGAAGGCCTCAAAAAGAGCAACAGCAGCTTCGGCGAGGAACAGAAATTGGAGAAGGAAAAAGTGGAAACTGGTGGAAATAAAGGTGACGAAGCTGCGCCGGAATATGATTCGCCAGACAGTGAAATAACTGATTCAGGATCTCAGGAAATGCATTCCAGTGCACTGAACAATAATATATGTTCCAATCATGAAGGATGTGAAGGACGCTCTTCACAGATAAAGCTGACAAAAGGTTTCTCAGCAAAGGAGTCCGTGAAGGGGCATATGGCAAGTTCTTTCTTTTACAACCTCAATAGCCAATATATTCTTTTCAATAAAGAAACACGGATTCATAGAGCTGGATTAAAGTTGTACGAGGACGTGTTTTCTGAATCAGAAATCTGCAAGCTGACTGATTTTGTAAATGATATTCATGCTGCTGGCCAGAACGGGGAACTCTCAGGTGAAACGTTTATACTATTCAACAAACAGATGAAGGGAAACAAGAGAGAGCTGATTCAGTTGGGTGTTCCGATATTTGGACAGATAAAGGATGATACCAAAAGCAATATCGAGCAGATCCCAGCACTCCTCCATGATGTCATTGATCACCTTATTCAATGGAAATTAATTCCAGAGTACAAAAGGCCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAATTTTCTCAACCATTCCTGAAACCACCCCATCTGGACCAGCCTCTGTCCACACTTCTTCTTTCTGAATCAACAATGGCTTTTGGACGTATCCTTGTCAGTGAAAATGATGGGAACTACAAAGGACCACTCATGCTGTCATTGAAGGAGGGGTCTCTTATAGTGATGAGGGGAAACAGTGCAGACATGGCAAGGCACGTAATGTGTCCATCCCCCAACAGAAGGGTGAGCATCAGCTTTTTCAGAGTGAGGCCAGATTCCAATCAATGCCTATCACCAGTTCCTACCATGACAACTGCGATGACTCTTTGGCAACCTGGCATTACTAGCCCATATACTTTGTCAAATGGAGCTCTAAGCGGCTATGAAGCAATGGATATGATGCCTAACTGGGGAATATTTGGTGCTCCAATTGTTATGCTACCACCTATGCGTCCTGTGGCAGTGAACTCTCGCAAACTTCCTCGAGGTGGGACTGGGGTTTTCTTGCCTTGGAAGGGAACATCCAGAAAACACACAAGGCATCTGCCACCTCGTGCCCAAAAAGGACGACTTATGGAATTACCCTCTCCAGTTGAATCACACTTGGGAGAGTCTACCTCTGAGCCCAGCATAGCTGTTGAAGGGTAG 1608 0.4726 MAAVPVSRTDPPAMVPPPLIVSDSFAKDAILAWFRGEFAAANAIIDALCGHLASIATASSDYEATFTAIHHRRINWIPIIQMQKYHSIADVALELRKVVDSKTEAEGLKKSNSSFGEEQKLEKEKVETGGNKGDEAAPEYDSPDSEITDSGSQEMHSSALNNNICSNHEGCEGRSSQIKLTKGFSAKESVKGHMASSFFYNLNSQYILFNKETRIHRAGLKLYEDVFSESEICKLTDFVNDIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDTKSNIEQIPALLHDVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPLSTLLLSESTMAFGRILVSENDGNYKGPLMLSLKEGSLIVMRGNSADMARHVMCPSPNRRVSISFFRVRPDSNQCLSPVPTMTTAMTLWQPGITSPYTLSNGALSGYEAMDMMPNWGIFGAPIVMLPPMRPVAVNSRKLPRGGTGVFLPWKGTSRKHTRHLPPRAQKGRLMELPSPVESHLGESTSEPSIAVEG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02067 535 SUPERFAMILY Clavaminate synthase-like 204 409 - -
Vian2g02067 535 MobiDBLite consensus disorder prediction 106 139 - -
Vian2g02067 535 Gene3D - 209 416 IPR037151 -
Vian2g02067 535 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 26 516 IPR044842 GO:0003729|GO:0006402|GO:0032451
Vian2g02067 535 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 314 411 IPR005123 -
Vian2g02067 535 MobiDBLite consensus disorder prediction 106 158 - -
Vian2g02067 535 MobiDBLite consensus disorder prediction 487 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02067 Vian-Chr2 40375868 40381807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02067 K10767 - gmx:100796344 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02067 2 40375868 40381807 Vian2g02067 2 40375868 40381807 ECH
Vian2g02067 2 40375868 40381807 Vian3g01916 3 22624981 22629595 PCT