Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02061 ATGGAGATCAAAGTTGTGGAGGAAGGCGTGCAGAAAGGAATCAGAGAGCCACTGGACCATCAGTTGGTCCATGCAAGCAAAAGGCATCCATGGATGCTTTATTTTTGTACATTCGTTGCAGTGTGTGGTTCTTACGAATTTGGTACTTGTGCTGGATATTCATCTCCCACTCAAGATGCTATCAGGAAGGATTTCAACCTGTCTTTGGCAGAGGCAATGAGAGTGTCAAGTGCTTTCTGTGTTGGGGGCTGGCTTGCTATTTACTTTTCTGAGGGTCCCGTGCCTCTGGACATTGGGAGGCTAGCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTTGGTTATAGTTCTACTCTCCAAAAAACAACTTCATGCATAAGATTTCGTTTCAGACACTTGCATGCTCAAAATACTAATATTTTACCATATGTGGGATGGATTGTACAAGTGGCATTCACCATTGGAAATGTACTTTCGTGGAGAGCTTTAGCTTTAATTGGTGAGTCTTACCTATTTAAATATAGTTCTAATGATGTTGGCCTAATTCCCACTTCTGTATTGCTACTGGGTCTGTTTATAATTCCAGAGTCTCCGAGATGGCTAGCGAAGAGAGGACGTAAAAAAGATTTTGAGGCAGCACTGCAAATACTTCGTGGCAAAGATGCTGATATATCAGAGGAGGCAGAGGAAGTTCAGGACTACATAACTACTTTGGAGCAGCTCCCAAAATCTAGGCTACTGGAATTGTTTCACAGAAGATATTTGCGCTCAGTCACTATAGGAATAGGCCTAATGGTCTGCCAGCAGTTTGGAGGAATCAATGCAATTTGCTTTTATGCCAGCAGTATTTTTGAACTAGCAAGATTTTCTCCCGCCATCGGAACTATATCATATGCTTGCCTTCAGCTTGTTGTCACAGGTATTGGAGCTGTCTTAATCGATAAAACTGGGAGGAAGCCCCTACTTCTATTATCCGGAACGGGAGTGGTGGCAGGGTGTACAATTTTAGCAGTTGCATTCTATCTCAAGGTCTACGAGGTGGGTGTTGCAGCTGTCCCAGCACTTGCCGTAACAGGCATACTGGTCTACATAGGATCATTCGGAATAGGAATGGGAGCAATTCCATGGGTTGTGATGTCCGAGATATTTCCTGTCAATATTAAAGGGCAAGCTGGAAGTTTGGCCACATTAACGAACTGGTTTGGTGCATGGTTATGTTCCTATACTTTCAACTTTCTCATGAGCTGGAGTTCTTATGGTACCTTCATTCTTTATGCAGCAATTAATGCATTGGCTATATTATTTATAATTTTTGCGGTGCCAGAAACCAAGGGGAAAAGCTTGGAACAATTACAAGCAGCCATTAACTCATAA 1377 0.4256 MEIKVVEEGVQKGIREPLDHQLVHASKRHPWMLYFCTFVAVCGSYEFGTCAGYSSPTQDAIRKDFNLSLAEAMRVSSAFCVGGWLAIYFSEGPVPLDIGRLATGYGMGVFSYVVGYSSTLQKTTSCIRFRFRHLHAQNTNILPYVGWIVQVAFTIGNVLSWRALALIGESYLFKYSSNDVGLIPTSVLLLGLFIIPESPRWLAKRGRKKDFEAALQILRGKDADISEEAEEVQDYITTLEQLPKSRLLELFHRRYLRSVTIGIGLMVCQQFGGINAICFYASSIFELARFSPAIGTISYACLQLVVTGIGAVLIDKTGRKPLLLLSGTGVVAGCTILAVAFYLKVYEVGVAAVPALAVTGILVYIGSFGIGMGAIPWVVMSEIFPVNIKGQAGSLATLTNWFGAWLCSYTFNFLMSWSSYGTFILYAAINALAILFIIFAVPETKGKSLEQLQAAINS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02061 458 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 445 IPR020846 GO:0022857
Vian2g02061 458 Gene3D MFS general substrate transporter like domains 25 458 IPR036259 -
Vian2g02061 458 Pfam Sugar (and other) transporter 92 454 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian2g02061 458 PANTHER - 27 453 - -
Vian2g02061 458 SUPERFAMILY MFS general substrate transporter 28 452 IPR036259 -
Vian2g02061 458 CDD MFS_GLUT6_8_Class3_like 34 451 IPR044775 GO:0008643|GO:0051119
Vian2g02061 458 PRINTS Sugar transporter signature 358 379 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian2g02061 458 PRINTS Sugar transporter signature 381 393 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian2g02061 458 PRINTS Sugar transporter signature 269 279 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian2g02061 458 PRINTS Sugar transporter signature 97 116 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02061 Vian-Chr2 40345704 40349604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02061 2 457 Organic Solute Cotransporters AT5G18840 47.379 3.26e-145 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02061 K03444 - gmx:100819822 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02061 2 40345704 40349604 Vian6g00889 6 26081857 26086552 ECH
Vian2g02061 2 40345704 40349604 Vian2g02061 2 40345704 40349604 ECH
Vian2g02061 2 40345704 40349604 Vian6g00883 6 26026672 26028931 ECH