Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02053 ATGGATGTCGCTTCCTACTCTCTTCTTTTCGTCTGCTTTCTTCAATCGGTCAGAGCAATATTAGACCCCAACGATTTCCTCGCTCTGCAATCCATTCGGAAATCGCTTCACGATGTCCCCGGTTCTAATTTCTTCGCCTCCTGGGACTTCACCGCCGATCCCTGCAACTTCCCCGGCGTTTACTGCGTCGACGATAAAGTCGTCGCGCTCAACCTCGGCGACCCCAGGGCCGGTTCGCCCGGTCTGACTGGAAAACTCGACCGTTCGATTTCCAAGCTATCTGCTCTCGCCGACCTCACCGTCGTCCCCGGAAGAATATACGGCCCTCTCCCTCAGTCGATCTCCCAGTTAAAAAACCTCCGGTTCCTCGGCGTCAGCCGGAATTTCATCTCCGGCGAGATTCCGGCGGGTTTAAGTCAGCTTCGCAATATTAGAACCATCGATCTCAGTTACAACCAGCTCACCGGAACAATTCCTCCGTCCATCGGAACCTTACCGCTGCTGACCAACCTTATCCTCTGCCACAACCGCCTCTCCGGTTCGGTTCCCTCGTTCGCCTCGGCTTTTTCCCTAACCCGGCTCGAACTGAAGCACAACGCTCTCTCCGGTTCCCTCGCGCCGTACTCTCTCCCTCCCTCCCTACACTACCTGTCTCTATCGTGGAACAAACTCACTGGACCAGTGGACCGCCTCTTAAAGCGCCTCAATCGGCTTAACTACTTGGACCTTGGCTTGAACCAGTTCACAGGCCCAATTCCGACTGAAATATTCTCATTCCCCCTCACCAACCTACAACTGGAAAGAAACCAATTCTCCGGCCCGGTCCAACCGGTCAACGAGGTGACCATCCAGACCGTTGATCTCAGCTACAATAGGTTATCCGGCCAGGTGTCGCCAATGCTGGCAAACGTCCAGAACCTGTATCTGAACAACAACTGGTTCACAGGGCAGGTTCCCGGCAGCTTCGTCGAACGGTTATTGGCGGCGGGCATTCAGATACTGTATTTGCAGCACAATTTTCTTACCGGCATTGCAATAAGCCCGACGGCGGAGATTCCGGTGAGCAGCACCCTGTGTTTGCAGTACAACTGCATGGTGCCACCGGTACAGACGGCGTGCCCCTTCAACGCCGGGAAGCGGAAAATCAGACCAGCTCAGCAGTGCAACCGCCGCTGA 1176 0.551 MDVASYSLLFVCFLQSVRAILDPNDFLALQSIRKSLHDVPGSNFFASWDFTADPCNFPGVYCVDDKVVALNLGDPRAGSPGLTGKLDRSISKLSALADLTVVPGRIYGPLPQSISQLKNLRFLGVSRNFISGEIPAGLSQLRNIRTIDLSYNQLTGTIPPSIGTLPLLTNLILCHNRLSGSVPSFASAFSLTRLELKHNALSGSLAPYSLPPSLHYLSLSWNKLTGPVDRLLKRLNRLNYLDLGLNQFTGPIPTEIFSFPLTNLQLERNQFSGPVQPVNEVTIQTVDLSYNRLSGQVSPMLANVQNLYLNNNWFTGQVPGSFVERLLAAGIQILYLQHNFLTGIAISPTAEIPVSSTLCLQYNCMVPPVQTACPFNAGKRKIRPAQQCNRR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02053 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 15 389 - -
Vian2g02053 391 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Vian2g02053 391 SUPERFAMILY L domain-like 23 365 - -
Vian2g02053 391 Gene3D Ribonuclease Inhibitor 188 380 IPR032675 -
Vian2g02053 391 Pfam Leucine Rich Repeat 143 163 IPR001611 GO:0005515
Vian2g02053 391 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Vian2g02053 391 FunFam Nuclear pore complex protein NUP107 23 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02053 Vian-Chr2 40270954 40272129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02053 25 369 Receptor kinase-like Gene Family AT3G51740 32.500 8.98e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02053 - - gmx:100817314 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02053 2 40270954 40272129 Vian2g02053 2 40270954 40272129 ECH
Vian2g02053 2 40270954 40272129 Vian3g01928 3 22868436 22869626 PCT