Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02010 ATGGGGGCTGGTGGCCGAACCTTTGTCCCTCCTTCCAACAGGAAATCAGAGGCCGATCCTCTGAAGCGGGTGCCATTTGAAAAACCTCCTTTTAGCCTCAGCCAGATCAAGAAAGCCATACCACCTCACTGTTTTCAGCGCTCTGTTCTCCGCTCATTCTCCTATGTCATTTATGATCTAACCATAGCCTTCTGCCTCTATTATGTTGCCACCCATTACTTTCACATCCTTCCCCAACCACTGTCTTTCCTTGCATGGCCAATCTACTGGGCTGTCCAAGGTTGTATCCTCACTGGCGTTTGGGTCATTGCTCATGAGTGTGGCCACCATGCTTTCAGTGACTACCAGTTGCTTGATGATATCGTTGGCCTTGTTCTCCATTCTGGTCTCCTAGTCCCATACTTTTCATGGAAATACAGCCATCGCCGTCATCACTCCAACACCGGTTCTCTCGAGCGGGATGAAGTATTTGTGCCAAAGCAGAAGTCCGGTATGCAGTGGTACTCTAAATACCTCAACAATCCACCAGGCAGAGTCCTCACACTAGTCGTCACCCTCACTCTTGGTTGGCCCATGTACCTGGCTTTTAACGTGTCAGGCAGGCCTTATCCAAGGTTTGCTTGCCACTATGATCCTTATGGTCCTATTTACTCTGATCGTGAACGACTTCAAATATATATATCAGATGTTGGAGTACTTGCAGTATGCTATGGCCTTTACCATCTTGTCATGGCAAAAGGGCTTGCCTGGGTGGTGTGTGTTTATGGAGTTCCGTTGCTAGTGGTCAATGGATTTCTGGTGTTGATTACATTCTTGCAGCATACTCACCCTGCATTACCGCACTACAATTCCTCTGAGTGGGACTGGTTGAGAGGAGCTTTGGCAACAGTTGACAGAGATTATGGAATTCTGAACAAGGTCTTCCATAATATTACAGACACTCATGTAGCACATCACTTGTTCTCCACAATGCCGCATTATCATGCAATGGAGGCTACAAAAGCAATAAGGCCCATTTTGGGAGAGTATTATCGGCTTGACGAGACTCCATTTGTGAAGGCAATGTGGAGAGAGGCAAGAGAGTGTGTTTACGTGGAGCCAGATCACGATACTGAGAACAAAGGTGTATTTTGGTACAACAACAAGTTGTGA 1152 0.4688 MGAGGRTFVPPSNRKSEADPLKRVPFEKPPFSLSQIKKAIPPHCFQRSVLRSFSYVIYDLTIAFCLYYVATHYFHILPQPLSFLAWPIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLVLHSGLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSGMQWYSKYLNNPPGRVLTLVVTLTLGWPMYLAFNVSGRPYPRFACHYDPYGPIYSDRERLQIYISDVGVLAVCYGLYHLVMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYNSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIRPILGEYYRLDETPFVKAMWREARECVYVEPDHDTENKGVFWYNNKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02010 383 CDD Delta12-FADS-like 47 329 - -
Vian2g02010 383 Pfam Domain of unknown function (DUF3474) 28 66 IPR021863 GO:0016717
Vian2g02010 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 14 382 IPR012171 GO:0016491
Vian2g02010 383 MobiDBLite consensus disorder prediction 1 23 - -
Vian2g02010 383 Pfam Fatty acid desaturase 85 345 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02010 Vian-Chr2 39743597 39744748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02010 1 383 Lipid Metabolism Gene Families AT3G12120 75.979 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02010 K10256 - gmx:547815 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02010 2 39743597 39744748 Vian2g02010 2 39743597 39744748 ECH
Vian2g02010 2 39743597 39744748 Vian3g02527 3 39367536 39368693 PCT