Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01934 ATGAGAGAGAAGAAAGGAAAATCCAAAAGAGAGTCCAGAGTGCTTCAATCTGATAGAGCTGCTGCCAGTTTGCAGTACCCACCTAATTGGAGTAGTGAACAATGTGACAAGTTGGATTTAATCAATAAACAGTGGATATTTTATCTCACTGAGAAGGGCTGTGCTAGAAGATCTTCTGGAGAATTGGATTACTTTGGAATTTGCAGAGGAACTGAAATATGGAGGATTGAGAATTTTCAACCAGTTCCATTGCCTAGATCTGAATATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGGGCTTATTTTTATGATATTCACTTCTGGATTGGAAAGGATACAAGTCAGGATGAAGCTGGAACAGCAGCCATTAAAACTATTGAACTTGATGCATCTCTTGGAGGACGTGCAGTGCAACACAGGGAAATTCAAGGGCATGAATCAGACAAATTTTTGTCATACTTTAAGCCATGTATAATACCATTAGAGGGTGGTGTCGCATCTGGATTTAAAAAGCCTGAAGAAGAGGAGTTTGAAACACGTTTGTATGTCCCTTTCGCACGGTCTTCTCTGAATCATGACGATGTGTTCATCCTAGATACTCAGAATAAGATTTATCAATTCAATGGTGCTAACTCCAATATCCAGGAAAGAGCCAAGGCTCTGGAAGTTATTCAGTTGTTGAAGGAAAAGTATCATGAAGGAAAATGCGATGTTGCAATTGTTGATGATGGCAAGCTGGATACTGAGTCAGATTCAGGTGAATTTTGGGTTCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATTGGTGAGGATGATATTGTCCCAGAGGCCATTCCTGCTCAACTTTATAGTATTGCTGATGGTGAGGTCAAGCCTGTAGAAGGTGAACTTTCAAAATCACTGTTGGAGAACTACAAATGCTATCTATTGGACTGTGGCGCTGAGGTATTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGAAAGAAAAGCAGCATGTCAAGCAGCTGAGGAGTTTGTTGCAAGTCAAAAAAGGCCAAAATCTACAAGGATTACCAGAATTATTCAAGGATATGAAACACATTCATTTAAGTCCAACTTTGACTCTTGGCCATCAGGGTCTGCAACTACCAGTGCTGATGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAACAACAAGGTATGGGTGTGAAAGGTGCGGCAAAAAGTACCCCAGTTGTTGAAGAAATTCCACCTTTGCTTGAAGGAGGCGGAAAGATGGAGGAAGATATTGGTAAATTCTATAGTGGAGATTGTTACATAGTGCTCTACACTTATCACTCTAGCGAGAGGAAGGAAGACTACTATTTGTGCAGTTGGTTTGGAAAAGACAGTGTTGAGGAGGACCAAAGGATGGCTATTCGATTGGCTACTACAATGTTCAACTCATTAAAGGGTAGACCTGTTCAGGGTCGCATATTTGATGGTAAAGAGCCACCACAGTTTATTGCTCTTTTCCAACCAATGGTGGTCCTCAAGGGAGGCTTGAGCTCTGGTTACAAAAAATTTATAGCAGATAAAGGCTTGCCAGATGAGACATACACAGCTGACAGTGTTGCACTTATTCGAATTTCAGGAACATCTCCTCATAATAATAAAGTGGTGCAAGTAGATGCAATTGCAGCATCGTTGAATTCTACCGAATGCTTTGTTTTGCAATCTGGCTCAGCTGTTTTCACTTGGCATGGGAATCAATGCTCCCTAGAGCAGCAGCAGCTTGCAACAAAAGTTGCTGAATTTTTAAAGCCAGGAGTTTCTCTAAAGCTTGCTAAAGAAGGAACAGAAACCTCAGCTTTCTGGTTTGCAGTTGGGGGAAAACAAAGTTATACCAGCAAAAAGGCCACTAATGACATTGTCCGAGACGCACATTTGTTCACTTTCTCTTTTAATAGAGGAAAGTTGCAGGTGGAGGAGATTTACAACTTTTCCCAAGATGATTTGTTAACAGAGGATATCCTCATACTTGACACGCACGCCGAAGTTTTCGTTTGGATTGGTCAGTGTGTGGATCCAAAAGAAAAGCAAAATGCATTTGAAATTGCCCAGAAATACATAGATAAGGCTGCATCTCTGGATGGACTATCTCCTCAAGTTCCACTATATAAAGTAACAGAAGGGAATGAGCCGTGCTTTTTCACGGCATATTTTTCTTGGGATCATGCAAAAGCTTTGGTTCCAGGGAACTCCTTCCAGAAAAAGGTGACATTACTCTTTGGGATTGGCCATGCTGTAGAGGAAAAGTCTAATGGGTCCAGTCAAGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTAAATAGCGCATTTAAGTCATCTCCTGAGGCAGCAGCTAGTGCGGATAAGTTAAACGGGCTAAATCAAGGAGGGCCAAGACAAAGGGCTGAAGCCTTAGCAGCCTTAAACTCTGCATTTAATTCATCATCTGGAGCCAAAATTTATACACCTAGGTCTTCTGGAAGAAGTCAGGGATCACAGAGAGCAGCAGCAGTAGCTGCTCTTTCTTCAGTTCTTACTGCTGAAAAGAAGAAAACTTCACCTGAAACTTCTCCTGTGGCAAGCACTAGTCCTGTTGTGGAAAACAGTAACTTTGGTGAGAAACATGTCTCAATTCCAGATACTAAAAGTGAGAGTGCCCCTTCTGAAACGGATGTTGTTGAAGAAGTTGTTCCTGAAGTCAAGGAGACAGAAGAATCAGCCACTGAAACTGGCACAAACGGGGATTCAGAACCAAAACAAGAAAATGTGGATAATGGAGGAAATGACAGTGAAAATAATCAAAATGTCTTCAGTTATGAGCAACTAAAGACTAAATCTGGTAGTGTTGTGTCTGGAATTGATCTTAAACGGAGAGAGGCATATCTGTCAGACAAAGAGTTCGAAACTGTATTTGGAATGAGCAAAGAGGCGTTCACTAAGTTACCAAGATGGAAGCAAGACATGCTGAAAAGGAAAAATTCTGTACATGTGCTCCTGCTTGTCTTCTTATTTCACAATGGACAACAGGAATTGGACTCTTCTCTTGCAGGTTTGGGATGGATTAAGAATTTCGTTGAGGTACAAATGGATTAA 3147 0.4156 MREKKGKSKRESRVLQSDRAAASLQYPPNWSSEQCDKLDLINKQWIFYLTEKGCARRSSGELDYFGICRGTEIWRIENFQPVPLPRSEYGKFYMGDSYIILQTTQGKGGAYFYDIHFWIGKDTSQDEAGTAAIKTIELDASLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEEFETRLYVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVIQLLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVIGEDDIVPEAIPAQLYSIADGEVKPVEGELSKSLLENYKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVASQKRPKSTRITRIIQGYETHSFKSNFDSWPSGSATTSADEGRGKVAALLKQQGMGVKGAAKSTPVVEEIPPLLEGGGKMEEDIGKFYSGDCYIVLYTYHSSERKEDYYLCSWFGKDSVEEDQRMAIRLATTMFNSLKGRPVQGRIFDGKEPPQFIALFQPMVVLKGGLSSGYKKFIADKGLPDETYTADSVALIRISGTSPHNNKVVQVDAIAASLNSTECFVLQSGSAVFTWHGNQCSLEQQQLATKVAEFLKPGVSLKLAKEGTETSAFWFAVGGKQSYTSKKATNDIVRDAHLFTFSFNRGKLQVEEIYNFSQDDLLTEDILILDTHAEVFVWIGQCVDPKEKQNAFEIAQKYIDKAASLDGLSPQVPLYKVTEGNEPCFFTAYFSWDHAKALVPGNSFQKKVTLLFGIGHAVEEKSNGSSQGGPRQRAEALAALNSAFKSSPEAAASADKLNGLNQGGPRQRAEALAALNSAFNSSSGAKIYTPRSSGRSQGSQRAAAVAALSSVLTAEKKKTSPETSPVASTSPVVENSNFGEKHVSIPDTKSESAPSETDVVEEVVPEVKETEESATETGTNGDSEPKQENVDNGGNDSENNQNVFSYEQLKTKSGSVVSGIDLKRREAYLSDKEFETVFGMSKEAFTKLPRWKQDMLKRKNSVHVLLLVFLFHNGQQELDSSLAGLGWIKNFVEVQMD 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01934 1048 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 302 454 IPR036180 -
Vian2g01934 1048 ProSiteProfiles Headpiece (HP) domain profile. 949 1014 IPR003128 GO:0003779|GO:0007010
Vian2g01934 1048 MobiDBLite consensus disorder prediction 1 20 - -
Vian2g01934 1048 FunFam Villin-like 1 638 759 - -
Vian2g01934 1048 Gene3D Severin 431 540 IPR029006 -
Vian2g01934 1048 SUPERFAMILY Actin depolymerizing proteins 543 635 - -
Vian2g01934 1048 Gene3D Severin 183 283 IPR029006 -
Vian2g01934 1048 MobiDBLite consensus disorder prediction 927 952 - -
Vian2g01934 1048 Gene3D Severin 640 753 IPR029006 -
Vian2g01934 1048 Gene3D Severin 61 182 IPR029006 -
Vian2g01934 1048 Pfam Gelsolin repeat 193 255 IPR007123 -
Vian2g01934 1048 Pfam Gelsolin repeat 556 607 IPR007123 -
Vian2g01934 1048 Pfam Gelsolin repeat 663 737 IPR007123 -
Vian2g01934 1048 Pfam Gelsolin repeat 79 161 IPR007123 -
Vian2g01934 1048 Pfam Gelsolin repeat 435 508 IPR007123 -
Vian2g01934 1048 Pfam Gelsolin repeat 302 375 IPR007123 -
Vian2g01934 1048 SUPERFAMILY Actin depolymerizing proteins 620 742 - -
Vian2g01934 1048 SMART VHP_1 979 1014 IPR003128 GO:0003779|GO:0007010
Vian2g01934 1048 Gene3D Villin headpiece domain 952 1013 IPR036886 GO:0003779|GO:0007010
Vian2g01934 1048 CDD gelsolin_S4_like 424 511 - -
Vian2g01934 1048 PRINTS Gelsolin family signature 698 717 IPR007122 GO:0051015
Vian2g01934 1048 PRINTS Gelsolin family signature 557 577 IPR007122 GO:0051015
Vian2g01934 1048 PRINTS Gelsolin family signature 361 382 IPR007122 GO:0051015
Vian2g01934 1048 PRINTS Gelsolin family signature 617 636 IPR007122 GO:0051015
Vian2g01934 1048 PRINTS Gelsolin family signature 669 691 IPR007122 GO:0051015
Vian2g01934 1048 PRINTS Gelsolin family signature 461 479 IPR007122 GO:0051015
Vian2g01934 1048 PRINTS Gelsolin family signature 494 514 IPR007122 GO:0051015
Vian2g01934 1048 SUPERFAMILY Actin depolymerizing proteins 66 192 - -
Vian2g01934 1048 CDD gelsolin_S3_like 292 381 - -
Vian2g01934 1048 CDD gelsolin_S1_like 70 174 - -
Vian2g01934 1048 Gene3D Severin 543 637 IPR029006 -
Vian2g01934 1048 CDD gelsolin_S5_like 542 633 - -
Vian2g01934 1048 FunFam Villin-4 286 392 - -
Vian2g01934 1048 FunFam Gelsolin 543 637 - -
Vian2g01934 1048 SMART VILL_6 421 514 IPR007122 GO:0051015
Vian2g01934 1048 SMART VILL_6 542 631 IPR007122 GO:0051015
Vian2g01934 1048 SMART VILL_6 177 272 IPR007122 GO:0051015
Vian2g01934 1048 SMART VILL_6 648 743 IPR007122 GO:0051015
Vian2g01934 1048 SMART VILL_6 289 382 IPR007122 GO:0051015
Vian2g01934 1048 SMART VILL_6 69 167 IPR007122 GO:0051015
Vian2g01934 1048 SUPERFAMILY Actin depolymerizing proteins 433 554 - -
Vian2g01934 1048 SUPERFAMILY VHP, Villin headpiece domain 941 1012 IPR036886 GO:0003779|GO:0007010
Vian2g01934 1048 Gene3D Severin 286 396 IPR029006 -
Vian2g01934 1048 MobiDBLite consensus disorder prediction 864 904 - -
Vian2g01934 1048 MobiDBLite consensus disorder prediction 912 926 - -
Vian2g01934 1048 Pfam Villin headpiece domain 979 1010 IPR003128 GO:0003779|GO:0007010
Vian2g01934 1048 MobiDBLite consensus disorder prediction 1 16 - -
Vian2g01934 1048 PANTHER VILLIN 66 1004 IPR007122 GO:0051015
Vian2g01934 1048 SUPERFAMILY Actin depolymerizing proteins 189 275 - -
Vian2g01934 1048 FunFam Gelsolin 59 181 - -
Vian2g01934 1048 CDD gelsolin_S6_like 648 744 - -
Vian2g01934 1048 MobiDBLite consensus disorder prediction 864 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01934 Vian-Chr2 38714020 38725600 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01934 - - pvu:PHAVU_001G131700g 1771.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01934 2 38714020 38725600 Vian3g02458 3 38215533 38231035 PCT