Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01560 ATGAAAGGAAAGAACAGGAGAAGTGGTGGTGGTGTCCATATGGAATACCTAATTCACATTCAGGAGATAAAGCCTTGGCCCCCTTCGCAATCTCTCAGATCACTTCGTTCTGTATTGATACAATGGGAGAATGGTGAACGCGCTTCAGGGTCTACTGCTCTTGTTTCCCCTTCTCTCGGTCCTAGTTCTGTTGCTGGTGAAGGAAAGCTCGAGTTTAATGAATCATTTAAGCTTCCTGTAACTCTGTCAAGGGATATGTCTATCAGAAATAGTACTGCTGAGGTGTTCCAAAAGAATTGCTTGGAGTTCCACTTGTACGAGACTCGAAGAGACAAAACTGTTAAAGGGCAGTTACTGGGGACTGCCATCATAGACTTGGCAGATTGTGGTGTACTAAGAGAGACTTTGAGCATTCGTACACCATTGAACTGCCAGAGGAACTACAGAAACATGGATCAGCCACTTTTGTTCGTTCAAATTGAGCCTGTTGAAAAGAGTCACCCTAGATCTTCTTTGAAAGACAGCTTGTCAAAGGTGGAGCCAAAGGACAATAATGGCAATGAATCTGTATCATCATTGATGAATGGAGAGTATGCTGAGGAAGCTGAGGTTGCCTCTTTTACTGATGATGATGTTTCCTCTCATTCATCTGCGGCTGCAGTCACTACTTCCTCTGATGTTTCCTCTCATTCATCTGTGGCTGCAGTCACTACTTCCACTGAGTCTAGCGCATGTATGCCTCCTGAACAGGAGAATGGACCAAATGGATCATTGCAAAACAGTGGTGCAAATGACAAGGGGTATCATCCCTTGGCCTCAGAGACAAGAGTTGAGAAGTTGAATGTGATGGAGCAAGATGCACATGAGACACTGGAGAGGAGTTCTTCCTATGTGTCATCCATGGATGTGTTCTCAGAAGTTGGGAGTCCAGTAAATGGTCATACCTCTAATATAAGCATTCCCCATAATAGATCAGTGACAACCCCAAAGCAGGTTGCTTCTTTTAATGCCGACTCTTCTTCTCCAAGCTTAGAGGAAAATTCTAAGAGCAGATTCAGAAGCAGTGAGCATGAAAATTTGGATCAGGAGGGTAGTGAAAAAGTTGCCAATTGCAGAGAAAAGGGTACAGGTGTTCAAATAAACAGTAATGAAAGTGATTTTGACATCTATTCTGGAAACATTACATCTGTAGGTAGAGACTACCTCGACAATAATCCAAGATTTGGTTTGGAAACCAAAGACAACTTAAGTGAGAGATCTGAGGAAGTAGATAAAAGTCTGCAGGAGGGGGGAAGTGATGCGTATTACAGTTCCATTGAGGATAAGGATGGAAATGAATCATTGCATTTTGATGAGCTGTATCTTGTTGAAGATGAATCAATGGTGCAATATGCAAAAGACCAAGCTTTAGTGGGTAGCAATTTATATTTTTTGGGTGGGTCAGATAATGGTATGAAAGGTAGTTTTATGAAAAATGAAAGATTAAAGCATGTTAAGTCTGTAAGGTCATCAGCAGACTCAGTTAGGAGTATTGGGCCACTTGGTAACAATCATCACGCTGAGGTAAAGGAAAATGGTGTTAATGGAGATGTCCAAAATAATGGAGGGAATATTCAAAGCAGTGACAGAAAAGATGCCAAGGTTTATCCAAGGGAAGCCAGAAATGCCATTTTAGACAGCAAGATTGAACAAATGGAAAACAAGATAAAGATGCTTGAGGGGGAGTTAAGAGAAGCTGCTGCTATTGAGGCTGCTTTATTTTCAGTAGTTTCCGAACATGGAAGCTCAATGAGTAAAGTTCATGCCCCAGCTCGGCGCCTTTCCAGGCTGTACCTTCATGCTTGTAAAGAAAATCTTCAAGCAAGAAGGGTTGGGGCTGCTAGAAGTGCTGTTTCAGGATTAGTCCTCGTTGCGAAGGCCTGTGGAAATGATGTCCCAAGGTTGACATTTTGGCTGTCTAATTCTATTGTGCTGAGAACAATTATAAGCAAAACTACCAAAGACGTGACAACATCTAATACTTCTGGATCTAGAACAAAAAGGAAGAATGGAGAGGTGAAAGTTGGAAAGGTAACACAACCACTAATATGGAGAGGGTTCTCTCCTAGGAAAAACGATTACATGGCTTTTGAGAATGGAGGTATAGGTAACTGGGATGACCCAAATGTGTTCACCTCAGCACTGGAAAAGGTAGAAGCTTGGATCTTTTCTCGCATTGTGGAATCTATTTGGTGGCAGTCTTTGACTCCATGTATGCAGAATTCTGATGCCAAGGTCACTCGTAAAGATTCTTCAAAAAACTATAAAAATATGTCTGGCTCATGTGACCAAGATAAGGAAAATTTATCGCTAGATATTTGGAAGAATGCTTTTAGAGAAGCCTGTGAAAGGCTATGTCCTATCCGCGCTGGAGGGCACGAGTGTGGTTGTTTGTCTGTGCTGCCTAGATTGATAATGGAGCAGTGTGTGGCAAGATTGGATGTTGCTATGTTCAATGCCATTCTTCGGGAGTCTGATGATGGTATTCCAACAGATCCTGTATCTGATCCCATTGGTGATCCCAAGGTTCTCCCCATTCCACCCGGTAAATTGAGCTTTGGATCTGGTGCACAGCTAAAAACTGCGATTGGTAACTGGTCTAGATGGCTAACTGACCTATTTGGTCTGGATGATGATGATTCACATGATAGAGATGACGATGACCTTGACAGCAATGATGGAAGTCAAAATTCATCCTTCAAATCCTTCCATCTTCTTAATGCATTAAGCGACCTTCTAATGCTTCCTAAGGATATGTTGTTAAATGCATCCATTAGGAAAGAGGTGTGCCCAATGTTTACTGCACCTCTAATCATGAGGATACTAGACAATTTTGTCCCAGATGAGTTTTGTCCTGATCCAATTCCTGATGATGTTTTTGAAGCTCTGGATTCACAGGATGATCTTGATGATGGAAATGAGTCTATCAACAATTTCCCATGCATTGCAACTCCCATTGCATATTCACCTCCACCAGCAACTACCATTACAAGCATTACGGGTGAGATTGGAAGTGAGTCTCAGCTTAGAAGAAGCAAATCTTCCATTGTTAGGAAGTCATACACGAGCGATGATGAACTCGATGAACTAAACTATCCATTATCTTTAATATTGAATAGTGGCTCCGCACCAGCATCAACAAAGTCCAATTGCAAGTGGAAAGAGAGTCGCGATGAATCTGCCATTAGATTTGAACTTCTTAGGGATGTTTGGATGAACAGTGAATGA 3267 0.419 MKGKNRRSGGGVHMEYLIHIQEIKPWPPSQSLRSLRSVLIQWENGERASGSTALVSPSLGPSSVAGEGKLEFNESFKLPVTLSRDMSIRNSTAEVFQKNCLEFHLYETRRDKTVKGQLLGTAIIDLADCGVLRETLSIRTPLNCQRNYRNMDQPLLFVQIEPVEKSHPRSSLKDSLSKVEPKDNNGNESVSSLMNGEYAEEAEVASFTDDDVSSHSSAAAVTTSSDVSSHSSVAAVTTSTESSACMPPEQENGPNGSLQNSGANDKGYHPLASETRVEKLNVMEQDAHETLERSSSYVSSMDVFSEVGSPVNGHTSNISIPHNRSVTTPKQVASFNADSSSPSLEENSKSRFRSSEHENLDQEGSEKVANCREKGTGVQINSNESDFDIYSGNITSVGRDYLDNNPRFGLETKDNLSERSEEVDKSLQEGGSDAYYSSIEDKDGNESLHFDELYLVEDESMVQYAKDQALVGSNLYFLGGSDNGMKGSFMKNERLKHVKSVRSSADSVRSIGPLGNNHHAEVKENGVNGDVQNNGGNIQSSDRKDAKVYPREARNAILDSKIEQMENKIKMLEGELREAAAIEAALFSVVSEHGSSMSKVHAPARRLSRLYLHACKENLQARRVGAARSAVSGLVLVAKACGNDVPRLTFWLSNSIVLRTIISKTTKDVTTSNTSGSRTKRKNGEVKVGKVTQPLIWRGFSPRKNDYMAFENGGIGNWDDPNVFTSALEKVEAWIFSRIVESIWWQSLTPCMQNSDAKVTRKDSSKNYKNMSGSCDQDKENLSLDIWKNAFREACERLCPIRAGGHECGCLSVLPRLIMEQCVARLDVAMFNAILRESDDGIPTDPVSDPIGDPKVLPIPPGKLSFGSGAQLKTAIGNWSRWLTDLFGLDDDDSHDRDDDDLDSNDGSQNSSFKSFHLLNALSDLLMLPKDMLLNASIRKEVCPMFTAPLIMRILDNFVPDEFCPDPIPDDVFEALDSQDDLDDGNESINNFPCIATPIAYSPPPATTITSITGEIGSESQLRRSKSSIVRKSYTSDDELDELNYPLSLILNSGSAPASTKSNCKWKESRDESAIRFELLRDVWMNSE 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01560 1088 Coils Coil 555 582 - -
Vian2g01560 1088 MobiDBLite consensus disorder prediction 218 266 - -
Vian2g01560 1088 MobiDBLite consensus disorder prediction 332 366 - -
Vian2g01560 1088 MobiDBLite consensus disorder prediction 218 269 - -
Vian2g01560 1088 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 14 129 IPR019448 -
Vian2g01560 1088 MobiDBLite consensus disorder prediction 167 191 - -
Vian2g01560 1088 ProSiteProfiles C2 NT-type domain profile. 4 164 IPR019448 -
Vian2g01560 1088 MobiDBLite consensus disorder prediction 349 366 - -
Vian2g01560 1088 MobiDBLite consensus disorder prediction 412 428 - -
Vian2g01560 1088 MobiDBLite consensus disorder prediction 527 541 - -
Vian2g01560 1088 MobiDBLite consensus disorder prediction 332 348 - -
Vian2g01560 1088 MobiDBLite consensus disorder prediction 506 546 - -
Vian2g01560 1088 MobiDBLite consensus disorder prediction 410 430 - -
Vian2g01560 1088 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 537 1085 IPR021827 GO:0005643
Vian2g01560 1088 MobiDBLite consensus disorder prediction 167 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01560 Vian-Chr2 32313982 32319858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g01560 - - vun:114162716 1875.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g01560 2 32313982 32319858 Vian2g01560 2 32313982 32319858 ECH
Vian2g01560 2 32313982 32319858 Vian8g00556 8 9599293 9610418 PCT