Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00637 ATGGCGAAGGAAGAAGTGTTTGAGTTTCTCGGGAACGTTCCTCTGCTACAGAGGCTTCCTGGCTCGTCTGTTCGGAAGATATCTGAGCTTGTAATTCCCAAATACTATGAGCCGAGAGAGTATGTTGTTCGTGAGGGGGAACGTGGGGATGGTCTGTACTTCATCTGGGAAGGAGAGGCTGAGGTTGTTAACTCTGTTAGTGCTGATGATGATGATCATCCAGAGTTTCAATTGAAAAGATATGACTACTTTGGTTTTGGGTTATCAAATGAAGTTCACCATGCTGATGTCATAGCTTTGACAAAGCTATCGTGCTTGGTACTGCCCCATGAGCATTTAGCATTGTTGCAATCGAAGTCTATCTGGAGTGCAGAAAAATCTGGTGATACATGCTCACCTGTGGAGCATATATTGCATTTGGAACCTATAGAGGTAGATATCTTCCGAGGAATCACTCCCCCAGATGCTCCAAAATTTGGAAAAGTATTTGGTGGACAAATAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAAGTTGTTCATAGCTTGCATGTCTATTTTCTTCTTGTGGGGGATTTTAATATACCCATTATATATCAAGTTAGCCGTCTCCGTGATGGGAAGAGTTTTGCTACTAGGAAAGTGGATGCAATTCAAAAGGGAAACGTCATATTCACTTTGCTGGCTTCATTTCATAAGGAGGAATTAGGGTTTCACCACCAGGAAGTGTCTATCCCATCAGTCCCTACACCAGATAAGCTTTTGTCTTTGGAAGAGCTTCGGGAGCAACGTCTTACCGACCCTCGCCTTCCAAGAACTTACCGGAACAAGGTTGCTACAGTTGAATTCATTCCCTGGCCCATAGAGATACGGTTCTGTGAACCTAGAACTTCAACAAATCAGACCAAATCTCCCCCTAGTTTGAGATACTGGTTCAGAGCAAGGGGAAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTGGTAGCATATACTTCAGATCTAATCTTTCTTCAAGTGAGTTTGAATCCCAACCGTAGGAAGGGCATGAAGACACGCGCTGTGAGTCTGGACCACTCCATGTGGTTTCACAGACCTTTAAGAGCCGATGACTGGATTCTATTTGTGATCTTCAGTCCTACTTCCTGTAATGCCCGGGGCTATGTTACTGGCCAAATGTTCAATCAAAAGGGAGAGCTTCTTGTATCAGCGGTTCAAGAAGGCCTAATGAGGAAAGTTATTTCTGAAAATTCAGCCATCAAATCTAAATTGTAA 1290 0.4357 MAKEEVFEFLGNVPLLQRLPGSSVRKISELVIPKYYEPREYVVREGERGDGLYFIWEGEAEVVNSVSADDDDHPEFQLKRYDYFGFGLSNEVHHADVIALTKLSCLVLPHEHLALLQSKSIWSAEKSGDTCSPVEHILHLEPIEVDIFRGITPPDAPKFGKVFGGQIVGQALAAASKSVDCLKVVHSLHVYFLLVGDFNIPIIYQVSRLRDGKSFATRKVDAIQKGNVIFTLLASFHKEELGFHHQEVSIPSVPTPDKLLSLEELREQRLTDPRLPRTYRNKVATVEFIPWPIEIRFCEPRTSTNQTKSPPSLRYWFRARGKLSDDQALHRCVVAYTSDLIFLQVSLNPNRRKGMKTRAVSLDHSMWFHRPLRADDWILFVIFSPTSCNARGYVTGQMFNQKGELLVSAVQEGLMRKVISENSAIKSKL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00637 429 ProSiteProfiles cAMP/cGMP binding motif profile. 15 85 IPR000595 -
Vian2g00637 429 CDD CAP_ED 15 117 IPR000595 -
Vian2g00637 429 Gene3D - 129 418 IPR042171 -
Vian2g00637 429 PANTHER ACYL-COA THIOESTERASE 119 417 IPR003703 GO:0006637|GO:0047617
Vian2g00637 429 FunFam Acyl-CoA thioesterase II 129 419 - -
Vian2g00637 429 SUPERFAMILY cAMP-binding domain-like 4 116 IPR018490 -
Vian2g00637 429 Pfam Cyclic nucleotide-binding domain 34 113 IPR000595 -
Vian2g00637 429 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 42 58 IPR018488 -
Vian2g00637 429 CDD Thioesterase_II_repeat2 146 238 - -
Vian2g00637 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 240 IPR029069 -
Vian2g00637 429 Pfam Thioesterase-like superfamily 160 415 - -
Vian2g00637 429 Gene3D Jelly Rolls 1 126 IPR014710 -
Vian2g00637 429 SMART cnmp_10 15 132 IPR000595 -
Vian2g00637 429 FunFam Acyl-CoA thioesterase II 1 124 - -
Vian2g00637 429 NCBIfam acyl-CoA thioesterase II 138 416 IPR003703 GO:0006637|GO:0047617
Vian2g00637 429 CDD Thioesterase_II_repeat1 313 415 - -
Vian2g00637 429 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 248 417 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00637 Vian-Chr2 8238270 8250816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00637 1 429 Acyl Lipid Metabolism Gene Families AT1G01710 67.133 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00637 K01068 - gmx:100805018 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00637 2 8238270 8250816 Vian2g00637 2 8238270 8250816 ECH
Vian2g00637 2 8238270 8250816 Vian9g00679 9 8587978 8596487 PCT