Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00412 ATGGCAAAGGGTCCCGGTCTCTACTCTGATATCGGCAAGAAGGCCAGGGATCTGTTGTTCAAGGACTACCAGAGTAACCAGAAGTTCACCGTCACCACCTACTCGCCCACCGGAGTTGCTATTACGTCATCAGGAACTAGGAAAGGTGAACTTTTTGTGGCTGATGTCAACACACAGTTGAAGAACAAAAACATCACTACTGATATCAAAGTTGATACAGATTCTAATCTCTTCACAACTATCACTGTCAATGAACCTGCTCCTGGTCTTAAGGCTATCTTTAACTTCAAAGTTCCTGACCAGAGGTCTGGAAAGGTGGAACTTCAGTACTTGCATGACTATGCTGGAATAAGCACCAGTGTTGGGTTGACAGCGAACCCGATTGTTAACTTCTCTGGTGTTGTAGGAACCAATGTTCTTGCTCTTGGTGCTGATCTTTCTTTTGACACCAAAATTGGGGAGTTAACCAAATCCAATGCTGGACTGAGCTTCACTAAGGATGACTTGATTGCCTCGTTGACTCTTTTTCTACTTCCCCTTTTCCCGAGTTCTGCCTGGAATGACAAAGGTGATGCTCTGAATGCTGCATATTATCATGTAGTTAACCCCTTGACCAACACTGCTGTTGGTGCTGAGGTCACTCATCGTTTCTCAACTAATGAGAACACTCTCACTCTTGGTACCCAACATGCATTGGATCCATTGACCACATTGAAGGCACGTGTTAACAACTTTGGTAAGACAAGTGCTCTCATCCAGCACGAGTGGCGTCCCAAATCATTCTTTACAATTTCTGGTGAGGTAGACACCAAGGCCATTGAAAAGAGTGCCAAGGTTGGATTGAGTTTGGTTCTCAAGCCCTAA 864 0.4479 MAKGPGLYSDIGKKARDLLFKDYQSNQKFTVTTYSPTGVAITSSGTRKGELFVADVNTQLKNKNITTDIKVDTDSNLFTTITVNEPAPGLKAIFNFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSGVVGTNVLALGADLSFDTKIGELTKSNAGLSFTKDDLIASLTLFLLPLFPSSAWNDKGDALNAAYYHVVNPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKTSALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLSLVLKP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00412 287 Pfam Eukaryotic porin 4 280 IPR027246 GO:0005741|GO:0055085
Vian2g00412 287 FunFam Outer mitochondrial membrane protein porin 1 286 - -
Vian2g00412 287 Gene3D Porin 1 286 IPR023614 -
Vian2g00412 287 ProSitePatterns Eukaryotic mitochondrial porin signature. 230 252 IPR001925 GO:0005741|GO:0008308|GO:0098656
Vian2g00412 287 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 287 IPR001925 GO:0005741|GO:0008308|GO:0098656
Vian2g00412 287 CDD Porin3_VDAC 5 286 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00412 Vian-Chr2 4768110 4771408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00412 K15040 - gmx:100777928 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00412 2 4768110 4771408 Vian2g00412 2 4768110 4771408 ECH
Vian2g00412 2 4768110 4771408 Vian1g00748 1 7771463 7773265 ECH