Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00748 ATGAGCACCAGTCCAGGGATATATTTTGATCTTGGCAAGAAGGCTAAAGTAAATGAAATTCTACCTGGATTCAGGAGCCTTTTCAAATGCACCATACCTGATTCAGGGAAGGTAGAACTACAACACTTGACTAACTACACTGGAATTACTGGATGCATTGGACTCGAAGGAAACTTAGAAAGAGGATATGATCCTGTTCTGAACTTATCGGGTCTTGTGGGAACAAACATCTTGTCACTTGGAGCCAATGTTGCTTTAGACATACCAACAAGAACATTCAGTAATCTGAATGCTGGATTAAGCCTCAACACTCCCTTCCTTGTTGCTTCCTTGACCACGCATGACAGTTTCGACATTCTGAAAGCCTCCTGTTATCATGAAGTGAACCCCCTAAGCAAAACCGCCATTGCAGCAGAGCTGAAGCATAGCTTGTCAATGGGGGAGACTAGTGCCACCATTGGTGCTCAGCATGCAGTTCTTCCGGAAACATTAGTAAAGGCTCGATTTGACACCTTTGGCAAGGCAGGTGCTGTTATTCAACAAGGGTTCTGGGAGAGGTTTTATGTGTCTATGGCTGGAGAAGTGGATTTTAAGACCACAGATAATAATTTACATCCCAAGGTTGGAGTATCTGTGGCTTTAAAACCCTAG 651 0.4363 MSTSPGIYFDLGKKAKVNEILPGFRSLFKCTIPDSGKVELQHLTNYTGITGCIGLEGNLERGYDPVLNLSGLVGTNILSLGANVALDIPTRTFSNLNAGLSLNTPFLVASLTTHDSFDILKASCYHEVNPLSKTAIAAELKHSLSMGETSATIGAQHAVLPETLVKARFDTFGKAGAVIQQGFWERFYVSMAGEVDFKTTDNNLHPKVGVSVALKP 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00748 216 Gene3D Porin 10 215 IPR023614 -
Vian1g00748 216 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 12 216 IPR001925 GO:0005741|GO:0008308|GO:0098656
Vian1g00748 216 Pfam Eukaryotic porin 12 205 IPR027246 GO:0005741|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00748 Vian-Chr1 7771463 7773265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00748 K15040 - gmx:100787061 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00412 2 4768110 4771408 Vian1g00748 1 7771463 7773265 ECH
Vian1g00748 1 7771463 7773265 Vian1g00748 1 7771463 7773265 ECH