Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00168 ATGGATTGCTGGTCATCTCCTCTACCTCTTCATGATGAATTCGAGAAGCTTGTCATTCGAATGAACCCTCCCAGAGTTGCTGTGGATAACGTTTCGAGCAGGACAGACACTGTGATAAAGGTTGATAGCGCAAACAGACGCGGGAGTTTGCTGGAGGTGGTTCAGGTTCTCACTGACATGAATCTCAGTGTTAGAAGAGCTTACATTTCCTCTGATGGAGAATGGTTCATGGATGTTTTTCATGTCACTGATCAGAATGGGAAAAAGTTTGTGCAAGATGATGTAGCCGACCGTATTCAACAGTCGCTGGGTCCAAGAGCCTCCAGTTTCCGATCCTTGAGAAGATCTGTTGGGGTTCAAGCTGAAGCAGAACATACAACCATTGAATTAACCGGAAGAGACAGGCCAGGGTTGCTTTCGGAAGTTTTTGCTGTTCTTGCAGACCTCAAATGCAATGTGGTAGCAGCAGAAGTCTGGACACACAATTCAAGAATGGCATCTGTTGTTTACATCACAGATGAGGAGACAGGATTGTCCATCGACAACCCGGATCGCCTTGCTAAGATTAAGCAGCTTCTACTGTATGTGCTGAAAGGAGACATAGATAAGAAGAGTGCCAACACTGCTGTTTCTGTTGGTTCTACTCACAAGGATAGGAGGCTGCATCAGTTGATGTATGCCGACCGTGATTATGACATAGACGATGGAGATTCTGGATCAACAAGTGACAGGAACAAGCTCCTTGTTACTGTTGATGATTGCATAGATAAGGGATATACTGTTGTGAACTTGAGGTGTCCTGATAGACCTAAGTTACTGTTTGACACGGTATGCACCCTCACAGACATGCAGTATGTTGTGTACCATGGAACTGTCATTGCCGAAGGACCAGAGGCATATCAGGAATATTATATAAGGCATGTGGATGGTTGTCCTATCAGTTCTGAAGCAGAAAGACAAAGAGTGATTCATTGTTTGGAGGCCGCTATTAGGAGACGAACTTCTGAGGGTATAAAGCTAGAACTTTGTGGGGAGGACAGGGTTGGGCTTCTGTCTGATGTAACCCGCATCTTTAGAGAAAATGGCCTTTCAGTCAACCGTGCTGAAGTTACAACCAGGGGCACTCAAGCTGTGAATGTTTTCTATGTGACTGATGTGACTGGAAATCCAGTTAAGAGTGAAACAATTGAAGCAGTTCGAAAAGAGATTGGTTTGGCCATACTGCAGGTCAAAGATGATGTCTGCTCAAAACCTCAACCCCATGAGAGAGGAAAATTCTCTCTGTCTGGTCTCTTTCGATCAAGCTCTGAGAAGTTTCTTTACAACTTGGGCTTTGGTCTGAGACATTCGAGTAAACCTAGGTTAAAGTTGAGGTTCGGAATCAGAAGGGGTTGTTGTGCTACAGTTACCAACATGGCCTTCACTGAAACCCCTTCAACCTCCAAAGTCATTGATTCCCATCTCCACGTGTGGGCTTCACCTCAAGAGGCTAGTAGATTCCCTTATTTTCCTGGTCAAGAACCCACTTTACAAGGAAATGCTGATTTTTTGCTCCAGTGTATGGAGGAGGCAGGAGTAGATGGTGCACTCATTGTGCAACCAATTAATCATAAATTTGATCATAGTTACGTCACAAGCGTTTTGAAGAAATACCCTACCAAATTTGTTGGTTGTTGCCTTGCTAATCCAGCTGATGATGGAAGTGGGCTTAAGCAATTTGAAGATCTTGTTTTGAAGGATGGTTACCGTGCTGTTCGATTTAATCCGTATTTGTGGCCAACCGGAGAAAAGGCATGCAAACTGATTTCTCTCACATATCTGCTTATGACAAATAAAGTTGGAAAGGCAATTTTCCAAAGGGCTGGAGAACTCAATGTAGCAGTGGGCTTCATGTGTATGAAGGGGCTTGGTCTGCATATTTCTGAAATTGAGCAACTGTGCACAGAATTTCCTTCAACAGTAGTATTGCTTGACCATTTGGCCTTTTGCAAACCACCAATAAATGATGAGGAAGCTCTTGTCTTTTCTCAACTTTTAAATCTGTCTAGATTCCCACAAGTACATGTGAAATTTAGTGCCCTTTTCAGAGTGTCAAGAGGACAGTTTCCTTATCTAGATTTGTCTGCTCTCTTATCCCAAGTTGTCTCTCACTTTGGTGCTAACCGTGTAATGTGGGGCAGTGATTTTCCATTTGTTGTTGCTGAATGTGGTTACAAAGGAGCCAAAGAAGCAGTGCATCATATTGCCAATGAGATCTCTTTGCCTTTATCAGATTTAGAGTGGATCATGGGAAAGACAGCTACACAACTCTTTCAAAACCAATTGACTCCACTCAAGAACTGA 2343 0.4341 MDCWSSPLPLHDEFEKLVIRMNPPRVAVDNVSSRTDTVIKVDSANRRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFHVTDQNGKKFVQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEETGLSIDNPDRLAKIKQLLLYVLKGDIDKKSANTAVSVGSTHKDRRLHQLMYADRDYDIDDGDSGSTSDRNKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGCPISSEAERQRVIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRGTQAVNVFYVTDVTGNPVKSETIEAVRKEIGLAILQVKDDVCSKPQPHERGKFSLSGLFRSSSEKFLYNLGFGLRHSSKPRLKLRFGIRRGCCATVTNMAFTETPSTSKVIDSHLHVWASPQEASRFPYFPGQEPTLQGNADFLLQCMEEAGVDGALIVQPINHKFDHSYVTSVLKKYPTKFVGCCLANPADDGSGLKQFEDLVLKDGYRAVRFNPYLWPTGEKACKLISLTYLLMTNKVGKAIFQRAGELNVAVGFMCMKGLGLHISEIEQLCTEFPSTVVLLDHLAFCKPPINDEEALVFSQLLNLSRFPQVHVKFSALFRVSRGQFPYLDLSALLSQVVSHFGANRVMWGSDFPFVVAECGYKGAKEAVHHIANEISLPLSDLEWIMGKTATQLFQNQLTPLKN 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00168 780 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 11 411 IPR040217 -
Vian2g00168 780 Pfam ACT domain 37 86 IPR002912 -
Vian2g00168 780 Pfam ACT domain 126 175 IPR002912 -
Vian2g00168 780 Pfam ACT domain 341 402 IPR002912 -
Vian2g00168 780 CDD ACT_ACR_4 337 408 - -
Vian2g00168 780 ProSiteProfiles ACT domain profile. 38 118 IPR002912 -
Vian2g00168 780 Pfam Amidohydrolase 484 771 IPR006680 GO:0016787
Vian2g00168 780 SUPERFAMILY ACT-like 35 104 IPR045865 -
Vian2g00168 780 Gene3D - 337 411 - -
Vian2g00168 780 Gene3D - 125 196 - -
Vian2g00168 780 ProSiteProfiles ACT domain profile. 127 204 IPR002912 -
Vian2g00168 780 Gene3D - 474 774 - -
Vian2g00168 780 CDD ACT_ACR_2 126 199 - -
Vian2g00168 780 FunFam Catalytic/ hydrolase 472 773 - -
Vian2g00168 780 CDD ACT_ACR_3 259 333 - -
Vian2g00168 780 SUPERFAMILY Metallo-dependent hydrolases 483 771 IPR032466 -
Vian2g00168 780 SUPERFAMILY ACT-like 124 193 IPR045865 -
Vian2g00168 780 SUPERFAMILY ACT-like 335 404 IPR045865 -
Vian2g00168 780 ProSiteProfiles ACT domain profile. 339 417 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00168 Vian-Chr2 1591991 1599479 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00168 - - gmx:100798999 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00168 2 1591991 1599479 Vian2g00168 2 1591991 1599479 ECH
Vian2g00168 2 1591991 1599479 Vian1g01367 1 14894818 14897288 ECH