Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01367 ATGGAGTGGCAACCATGTACGGATGAGTACGAGAAGCTCGTAATTCGCATGAGCACTCCCAGGGTTGTCATAGATAATGCCGTGTGCTCCACCGCAACAATAGTCAAGGTTGATAGCGGAAGAAAACATGGGATACTTTTGGATGCCGTACAAGTGCTTTCTGATCTAAATCTTTCAATTAAGAAGGCTTACATTTCCTCCGATGGGAGATGGTTCATGGATGTTTTTCATGTTACTGATCAAAACGGAAACAAGCTAACCGATCAGAGCGTTTTGAATTATATTGAACAGTCGCTTGGCGGAATTCACAATGGGAGTGCCAATGTCTTAAACGGTCTCACTACCCTTGAATTAACGGGCACAGACCGCGTTGGTCTTCTTTCGGAGGTGTTTGCTGTACTAGCTGAGCAGCAATGTGATGTGGTTAATGCTAAGGTTTGGACTCACAATGGCCGGATTGCCTCTTTAATCTATGTGAAAGACAGCAGTTCTGGGACTCTTATCGAGGACTCTCAGAGAATTAAAACTATTGAAGCACGTTTAAGAAATGTTCTAAAGGGTGACAATGATATTAGGAGTGCGAAAACTTCCTTCACTAACGCCGTTGTGCACACAGAAAGAAGGCTGCACCAGATGATGTACGCTGATCGTGATTACCAAAGGAATCCCATTTTCAAGTCTACTTCTGATATCCCAGTAGTCACCGTTCAAAATTGGGCCGAAAGGGGTTATTCGGTTGTCAATGTGCAGTGCAAGGATCGAATTAAACTTTTGTTTGATGTGGTCTGTAATTTGACTGACATGGAATATGTTGTGTTCCATGGAACTGCCAAGACAACAGTTGACCAAGCGTATCTGGAGTTTTATATAAGACACAAGGATGGGACTCCAATTAGTTCAGAACCAGAACGTCATCGTGTGATTCAATGCTTGCAAGCTGCTGTGGAGAGAAGGGCATTTGAGGGTGTTATGTTAGAGTTATGTACGGAGGATAGACAGGGGCTTCTAGCAGAAGTGATGAGAACTTTTCGAGAGAATGGGCTTAATGTGACAAGGGCGGAGATATCTACCATTGGGGACAGGACATCAAATGTGTTTTATGTAACAGATGCGATCGGATACCCTGCGGATCCAAAAATCATCGAATCTGTTAGGCAGAAAGTAGGATTGAGCCATTTAAAAGTGAAGGAGTTAGCATTGGTATGCCACGAGAAGGCAGAAAGGGAAGATGAAGCAGTTGGGGTTGGTGGGGCAGTGTTGCTGTGTCTGGGGAGCCTCGTGAGAAGGAATCTATACAATTTGGGTTTGATAAAATCGTGCTCTTAA 1326 0.4389 MEWQPCTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSGRKHGILLDAVQVLSDLNLSIKKAYISSDGRWFMDVFHVTDQNGNKLTDQSVLNYIEQSLGGIHNGSANVLNGLTTLELTGTDRVGLLSEVFAVLAEQQCDVVNAKVWTHNGRIASLIYVKDSSSGTLIEDSQRIKTIEARLRNVLKGDNDIRSAKTSFTNAVVHTERRLHQMMYADRDYQRNPIFKSTSDIPVVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHGTAKTTVDQAYLEFYIRHKDGTPISSEPERHRVIQCLQAAVERRAFEGVMLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGDRTSNVFYVTDAIGYPADPKIIESVRQKVGLSHLKVKELALVCHEKAEREDEAVGVGGAVLLCLGSLVRRNLYNLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01367 441 CDD ACT_ACR_3 244 318 - -
Vian1g01367 441 ProSiteProfiles ACT domain profile. 115 196 IPR002912 -
Vian1g01367 441 Gene3D - 321 396 - -
Vian1g01367 441 Pfam ACT domain 114 166 IPR002912 -
Vian1g01367 441 Pfam ACT domain 324 376 IPR002912 -
Vian1g01367 441 CDD ACT_ACR_1 32 100 - -
Vian1g01367 441 Gene3D - 113 188 - -
Vian1g01367 441 SUPERFAMILY ACT-like 29 100 IPR045865 -
Vian1g01367 441 SUPERFAMILY ACT-like 111 185 IPR045865 -
Vian1g01367 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Vian1g01367 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Vian1g01367 441 SUPERFAMILY ACT-like 322 386 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01367 Vian-Chr1 14894818 14897288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01367 - - gmx:100794729 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00168 2 1591991 1599479 Vian1g01367 1 14894818 14897288 ECH
Vian1g01367 1 14894818 14897288 Vian1g01367 1 14894818 14897288 ECH