Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03905 ATGGCAGAAAAAACGTTAATCGTAGAAGTGGAGAAAGCGAAAGAGGGCACAGAAGAAAGGCCATCAATGGGTCCTGTCTACCGTAGCGTTTTCTGCAATGATCCAACTCCTCCTCCCATACAAGGTCTCCATACATGCTGGGATATTTTTAGGATGTCGGTGGAGAAATATCCTACGAAGGCAATGCTTGGTGTTCGTGAAATTGTGGATGGGAAGCCTGGCAAGTACAAGTGGCAAACTTACCAAGAGGTGTACGACATGGTGGTCAAGGTTGGAAATTCCATTCGTGCTTGTGGTTATGGGGAGGGAGTAAAATGTGGTATATATGGTGCCAATAGCCCAAAATGGATTATGAGCATGCAGTGTTCTGAATTACGAGATGCCGTTTATAGTGCTGCTAAACTAGCTTATATCTTTGAAATATTTTCTGACACATTGCAACATTATTGCAGGCCTGCAATGCTCATGGACTTTTCTGTGTTCCTTTATATGATACCTTGGGGTCATGATCAGACTTTTGATCTTCCTGAGAAAAAGAAAAGTGATGTATGTACAATAATGTATACCAGCGGAACTACTGGTGACCCTAAGGGTGTATTGATAACCAATGAAAGCATTATCACACTTTTAGCTGGGATTGACAAAGTTCTGATGAGCTGCAATGAGAAATTGAGTGAAAAAGATGTATACCTATCATACCTTCCTCTTGCACATATCTTTGATAGGGTCATTGAGGAGGCAATGATAATGCATGGTGCCTCAATAGGTTTCTGGCGTGGAGATGTCAAATTGTTACTAGAAGACATTGGGGAGCTAAAGCCAACCATTTTCGTTGCAGTTCCCCGTGTACTTGACAGAGTATACAATGTATTTCCTATCCTCAATTTGATAAACAGGTTTGAATCAGAAAATTTCTACAGGGGGCTTCATGAAACAGACAGTGTTCAATTTCGCCTACTCATAGTAAAGCAAGGTTTAGGGGGAAGGGTACGTATTATTTTGTCTGGAGCAGCACCTCTATCCAAACATGTGGAAGGTTATCTGCGGGTGGTGACTTGTGCTCATATCCTACAAGGATATGGTCTAACTGAAACCTGTGCGGGAACCTTTGTGTCATTACCAAACGAAAAGGACATGCTTGGCACAGTGGGGCCTCCTGTACCATATGTGGATGTGTGCCTAGAATCTATTCCTGAAATGGGATACGATGCACTTGGAGACCCCCCAAGAGGAGAAATATGTGTGAGGGGAAGTACAGTGTTCAAAGGGTACTACAAACGTGAAGACCTAACCAAAGAGGTCATGACCAATGGCTGGTTCCACACAGGTGACATTGGGGAGTGGCAACCAAATGGAGCCATGAAAATTATTGATAGGAAAAAAAATATATTCAAGCTTTCACAAGGAGAATATGTTGCTGTTGAACACCTGGAGAACATTTATGTTCAAGCTTCTGTCGTTGATTCTATATGGATTTATGGAAATAGTTTTGAGTCATACTTAGTTGCTATTGTTAACCCCAACAAGCAAGCAATTGAAAAATGCGCAGAAGAAAATCATATAACTGCAGACTTTGATTCTGTCTGTGAAGATTCGAGAACAAAAACTTACGTAATTGGAGAGCTCGTCAAGCTTGCAAAAGAAAAGAAGTTAAAAGGTTTTGAGTTTATTAAAGCAGTTCATCTTGACCCAGTTCCATTTGACATGGAACGTGGCCTTATGACTCCGACATTTAAGAAGAAAAGACCAGAACTGCTTAAATACTATCAGAATACCATTGACGACATGTATAAAACACTGAACGAAAGCAACAAATCCAATGCTTGA 1827 0.4105 MAEKTLIVEVEKAKEGTEERPSMGPVYRSVFCNDPTPPPIQGLHTCWDIFRMSVEKYPTKAMLGVREIVDGKPGKYKWQTYQEVYDMVVKVGNSIRACGYGEGVKCGIYGANSPKWIMSMQCSELRDAVYSAAKLAYIFEIFSDTLQHYCRPAMLMDFSVFLYMIPWGHDQTFDLPEKKKSDVCTIMYTSGTTGDPKGVLITNESIITLLAGIDKVLMSCNEKLSEKDVYLSYLPLAHIFDRVIEEAMIMHGASIGFWRGDVKLLLEDIGELKPTIFVAVPRVLDRVYNVFPILNLINRFESENFYRGLHETDSVQFRLLIVKQGLGGRVRIILSGAAPLSKHVEGYLRVVTCAHILQGYGLTETCAGTFVSLPNEKDMLGTVGPPVPYVDVCLESIPEMGYDALGDPPRGEICVRGSTVFKGYYKREDLTKEVMTNGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVEHLENIYVQASVVDSIWIYGNSFESYLVAIVNPNKQAIEKCAEENHITADFDSVCEDSRTKTYVIGELVKLAKEKKLKGFEFIKAVHLDPVPFDMERGLMTPTFKKKRPELLKYYQNTIDDMYKTLNESNKSNA 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03905 608 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Vian1g03905 608 Pfam AMP-binding enzyme 175 467 IPR000873 -
Vian1g03905 608 SUPERFAMILY Acetyl-CoA synthetase-like 41 600 - -
Vian1g03905 608 Gene3D - 41 459 IPR042099 -
Vian1g03905 608 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03905 Vian-Chr1 62169537 62175667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03905 3 601 Acyl Lipid Metabolism Gene Families AT4G23850 58.850 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03905 K01897 - gmx:100811306 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00203 10 1785168 1796646 Vian1g03905 1 62169537 62175667 PCT