Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03854 ATGGGTGAGAAAGAGTCGGAGAAAGTAGTTTGGGAACCAATGAGAACCTCTGCTGCCACTCTCATTGCACCAACTGCACACCACCGAACCACACCAAAGCTTTTAGTCATTCTCGTCCTCTTTGTCTCCGTCACCTACGTCGTCTACACGCTCAAGCTCGTCGCAACCTCACACGCATGCGGCCACGTTTCATTCCCCACCGCCACCTTCTCCAAAACCGTTCCCGCCGGCAATGCCTCCGCTACTGTCACCGTCCCAGCCATACCCTCCGTTCTCCGACGGGAGTCCCGCGAAACGAACTCCGACGACCGGACAGACCTCCGCCACGTGGTGTTCGGAATCGCCGCGTCGGCGAAGCTCTGGGAGCAGAGGAAGAACTACATCAAACTCTGGTATCGCCCACGGGAGATGCGCGGCGTGGTGTGGCTCGACGAGAAGGTGAAATCGAGGGAGGATAGGGATGCGTTGCCGCCGATTAGAATCTCCGGCGACACCGAGAGGTTCCGTTACACCAACAAGCAGGGGCACCGGTCCGCCATCAGGATCTCGCGGATCGTGGCGGAGACGCTGAAGCTGGGGATGAAGGATGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTCATGACTGAAAACCTAATTAGCGTTCTGAGGAAATACGATCACAATCAGTTCTACTACATTGGGAGTTTATCGGAGAGTCACTTGCAGAACATTTTCTTCTCTTACAACATGGCTTACGGTGGAGGAGGTTTTGCAATTAGTTATCCTCTCGCTAAGGCTCTGTACAAAATGCAGGATCGCTGCATTCAGCGTTACCCGGGTCTCTATGGTTCCGACGATAGAATGCAAGCGTGTATGGCCGAACTCGGTGTTCCACTCACAAAGGAAATCGGTTTTCACCAGGAATTGGTTTGTAGTCTTGCAAGTGTATACGTTCTGATAACATCCATGCTGATCGGCGCTGATTTATTGGAACAGTATGATGTGTATGGAAACCTGTTTGGCCTTCTGGCATCTCATCCCGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATCTTCCCCAACGCTCCGAGGAGAAACTGTTGCAGAGTGAGGAGGTCGAAGGAGAAAGAAAAGATGGTGATAGATGTGGGTATGTGCAGAGATGGTGAGGTAAGCGAGACATAA 1188 0.5286 MGEKESEKVVWEPMRTSAATLIAPTAHHRTTPKLLVILVLFVSVTYVVYTLKLVATSHACGHVSFPTATFSKTVPAGNASATVTVPAIPSVLRRESRETNSDDRTDLRHVVFGIAASAKLWEQRKNYIKLWYRPREMRGVVWLDEKVKSREDRDALPPIRISGDTERFRYTNKQGHRSAIRISRIVAETLKLGMKDVRWFVMGDDDTVFMTENLISVLRKYDHNQFYYIGSLSESHLQNIFFSYNMAYGGGGFAISYPLAKALYKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKEIGFHQELVCSLASVYVLITSMLIGADLLEQYDVYGNLFGLLASHPVTPLVSLHHLDVVEPIFPNAPRRNCCRVRRSKEKEKMVIDVGMCRDGEVSET 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03854 395 Gene3D - 97 313 - -
Vian1g03854 395 Pfam Protein of unknown function, DUF604 327 367 IPR006740 -
Vian1g03854 395 Pfam Protein of unknown function, DUF604 238 303 IPR006740 -
Vian1g03854 395 PANTHER FRINGE-RELATED 30 362 - -
Vian1g03854 395 FunFam Fringe-related protein-like 97 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03854 Vian-Chr1 61609047 61612278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03854 359 394 Glycosyltransferase AT4G23490 50.000 2.40e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03854 - - gmx:100818244 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03854 1 61609047 61612278 Vian1g03854 1 61609047 61612278 ECH
Vian10g00248 10 2145474 2149320 Vian1g03854 1 61609047 61612278 PCT