Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03840 ATGAGAGGGATTCATGCGACTGATGCTAACAACACTTTCGACACTATTAACGCTGCTGCTTTTGCCATAGCCTCTGCTTCCCACAACCGCCTTTCTCAACCTCCTACCCAGAAGAAAGGATGGGGAAGCTGGTTGAGCAAAATTGGGTGTTTTGGATATCAAAGAAACAGAAAGCGCATTGGACATGCGATCCTTGTTCCAGAAACAGCCACCAATGGAGCTGATCCTGCCGGAGCTGTCAGTTCAACACAAGCAGCAAGCATAACACTCCCCTTCGCCGCCCCTCCGTCATCTCCGGTATCTTTCTTTCAATCAGAACCTCCCTCAACCGCACACTCACCGGTTGGTAAAATCTCCCACACTTGTATCTCTGCCAGCATGTACTCTCCTGGTGGTCCTGCTTCGATCTTTGCCATTGGCCCTTTTGCTCATGAAACCCAATTAGTATCACCACCTGTTTTCTCGGCTTCATCCACCGCTCCTTTCACCCCACCTCCCGAATCTGTCCACTTGACCACCCCTTCTTCGCCGGAGGTTCCATTTGCTCAGCTTCTTGACCCCAACAACAGGAATTCCGACACCTTTCACCGCTTCCAAATATCTCACTACGACTTCCAGTCCTATCAGTTTCACCCCGGAAGTCCAGTTGGTCAACTCATATCACCCAGATCCGCCATCTCTGCCTCCGGCGCCTCATCGCCGCTCCCTGACTCTGAAATTAATGCCACTCTCTCCCATATTCTTGATTTCCAAAGACCAGACCCTCCCAAGCTTCTCGGCATTGATAAACTTTCTGCTTATGAAAACAGGAAGTCAAACCAAGGTTCCGGCTCGCTCACCCCTGATGCTGCAAGGTCCACAGCTCAACCCGGTTTTCTTTCAAATCATTGGGTTTCTGAGATCAAAATGTCCCCACGTCCAAGCAACAATCGGGTTAATGAGATCAGTATAAATCATAGAGTTTCATTTGATATATCTGCCCAGAAAGTCTTGGAATCTCTGGAAAACAACCCAGCAGCATCGGCGTGGACTAAGGTCATGTCGAAATTGAAAAACGATTCTCCAACAGCAGCAGACAAAGAAGATAATTTTGGAGAAACCGGGTCCAACGAGAAACAAGTCCTTGCTGAAACTCACAGTGATCAACCGCTGGAAACTAATTTGAGTGGAGATGATGCAAGAGTTCACGAGAAGGATCAGTCTTTAACTTGTGCTAAAGAATTCAATTTTGATAAAGCAGATGGAGGGGATTCTCTTGCTCCCAATATAGTTGCTGACTGGTGGGCTAATGAGAAAGTTGCAGGGAAGGAGAGAGGGGCCACCAAAGATTGGTCCTTTTTCCCAATGATTCAACCTGGTGTCAGCTAA 1368 0.4788 MRGIHATDANNTFDTINAAAFAIASASHNRLSQPPTQKKGWGSWLSKIGCFGYQRNRKRIGHAILVPETATNGADPAGAVSSTQAASITLPFAAPPSSPVSFFQSEPPSTAHSPVGKISHTCISASMYSPGGPASIFAIGPFAHETQLVSPPVFSASSTAPFTPPPESVHLTTPSSPEVPFAQLLDPNNRNSDTFHRFQISHYDFQSYQFHPGSPVGQLISPRSAISASGASSPLPDSEINATLSHILDFQRPDPPKLLGIDKLSAYENRKSNQGSGSLTPDAARSTAQPGFLSNHWVSEIKMSPRPSNNRVNEISINHRVSFDISAQKVLESLENNPAASAWTKVMSKLKNDSPTAADKEDNFGETGSNEKQVLAETHSDQPLETNLSGDDARVHEKDQSLTCAKEFNFDKADGGDSLAPNIVADWWANEKVAGKERGATKDWSFFPMIQPGVS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03840 455 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 8 455 IPR040420 -
Vian1g03840 455 MobiDBLite consensus disorder prediction 157 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03840 Vian-Chr1 61447579 61449701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03840 - - vra:106768529 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03840 1 61447579 61449701 Vian1g03840 1 61447579 61449701 ECH
Vian10g00267 10 2470803 2472884 Vian1g03840 1 61447579 61449701 PCT