Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00267 ATGAGAGCTGTTAACAACACTTTGGAGACTATCAACGCTGCTGCAACTGCCATCGCTTCGGTAGACGATCGCGTTAATCAATCTCTTCCTCACGTCCAGAAGAAAACCTGGGGAAGCTGGCTGAGCATATATTGGTGTTTTGGACACCGCAAAAACCAAAAGCGAATTGGGCATGCAGTCCTTGTTCCCGTAAGCACACCTTCTGCTGCAGATGCTACTGCTGCAGCAGTAGGTTCAACAGCTGCACCTAGTATTCCATTCCCCTTCGCCGCACCTCCCTCGTCTCCTGTATCTTTCCTCAACTCAGAACCTCCTTCTCTTGCTCAATCCCCAGGTGGTATCCTATCTCTCACTTCTGTGTCTGCCAGCATGTACTCTCCCGGTGGTCCTTTATCTATCTTCGCCATTGGACCTTATGCCCACGAAACACAATTAGTTTCACCACCCGTTTTCTCAACATTCACCACTGAACCTTCAACCGCTCCCTTCACTCCACCTCCCGAATCTGTCTACTTGACCACACCTTCTTCACCTGAAGTGCCGTTTGCTCAACTGCTTGATCCCAACAACAAAAATGCCGATACCTATCAAAGGTTCCAAAGATCTCTATATGACTTCCACTCCTATCAGCTTCAACCTGGAAGCCCTGTTGGTCAACTCATTTCACCAAGATCAGCTTTCTCAGCTTCTGGCACCTCATCTCCTTTCCCTGATGCTGAGTTCTCTTCTCGTGGCTCCATCCTTCTTGACTTTCCAACGGGTGACCCTACCAAGCTTTTAAACATTGATAAACTGTCTGCTCGTGAAAAACACAAGTCACGTCAAGGCTCTGGCTCTCTCACCCCGGATTCTATACGATCCACAACTCAAGCTGCTTTTCTTCCCAGTCACTGGGTTTCTGAGGTCATAAGGTCTCCACATCCAAGAAAAAATCGCCCCAATGATATTAGTGTAAATCACAGCCTCTCTATCGAAGTGTCTTCCCAGGAAGCATTGAAATGTGTGGAAAACAAGGCAGTGACATCGACTAAATCACTTCCATTCAAAACTGATACACCAGGACCAGAAAAAGAAGATAATTCAAGAGAAGCCCTCGTGAACGAAACTCACAACGATGTCCCCCAGGAGATCGCAGACGATGAAGATGTGGAAAGCGTTCATCATAAGGATGAAAGTGTAACATTTTCTTCTCCTAAAGAATTCAACTTTGATAATGCAGAAGGAGGGGATTCTCCTGGGCCGAATTTAGTTATTGAGTGGTGGGCTAATGAGAAAGTTGCAAGCAAGGAAGTAGAATCCTCCAAGAATTGGTCTTTCTTCCCGATGGGGTTGGCCAATAGCCAATGA 1347 0.467 MRAVNNTLETINAAATAIASVDDRVNQSLPHVQKKTWGSWLSIYWCFGHRKNQKRIGHAVLVPVSTPSAADATAAAVGSTAAPSIPFPFAAPPSSPVSFLNSEPPSLAQSPGGILSLTSVSASMYSPGGPLSIFAIGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPESVYLTTPSSPEVPFAQLLDPNNKNADTYQRFQRSLYDFHSYQLQPGSPVGQLISPRSAFSASGTSSPFPDAEFSSRGSILLDFPTGDPTKLLNIDKLSAREKHKSRQGSGSLTPDSIRSTTQAAFLPSHWVSEVIRSPHPRKNRPNDISVNHSLSIEVSSQEALKCVENKAVTSTKSLPFKTDTPGPEKEDNSREALVNETHNDVPQEIADDEDVESVHHKDESVTFSSPKEFNFDNAEGGDSPGPNLVIEWWANEKVASKEVESSKNWSFFPMGLANSQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00267 448 MobiDBLite consensus disorder prediction 264 285 - -
Vian10g00267 448 MobiDBLite consensus disorder prediction 369 415 - -
Vian10g00267 448 MobiDBLite consensus disorder prediction 345 364 - -
Vian10g00267 448 MobiDBLite consensus disorder prediction 373 395 - -
Vian10g00267 448 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 442 IPR040420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00267 Vian-Chr10 2470803 2472884 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00267 - - gmx:100777876 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00267 10 2470803 2472884 Vian1g03840 1 61447579 61449701 PCT