Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03819 ATGGCCACTCAACCCACCAACCATCCAAACTCAGTATACGATTTTAATGTCAAGGATACTAAAGGTGATGATGTTGATCTTGTCACTTACAAAGGAAAGGTATTGGTCATTGTTAATGTTGCTTCCAAATGTGGCATGACCAACTCAAATTATGTGGAGTTGAATCAACTATATGAGAAGTACAAAGACAAAGGGCTGGAGATTCTGGCATTTCCATGTAATCAATTTGGGGAGGAAGAACCTGGAAGCAATGATCAAATTAAGGAGTTTGTCTGCACTCGCTTTAAATCTGAATTTCCCATCTTTGATAAGATTGAAGTGAATGGGGACAATTCTGCTCCTTTATATAAATTCTTGAAGTCAGGTAAGTGGGGAATATTTGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTAGTTGACAAGGATGGGCAAGTGGTAGATCGCTATTATCCCACCACATCTCCTCTTAGCCTTGAGCGAGACATCCGTAAGCTACTTGGTTTGTCTGAATGA 516 0.3992 MATQPTNHPNSVYDFNVKDTKGDDVDLVTYKGKVLVIVNVASKCGMTNSNYVELNQLYEKYKDKGLEILAFPCNQFGEEEPGSNDQIKEFVCTRFKSEFPIFDKIEVNGDNSAPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDIRKLLGLSE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03819 171 ProSiteProfiles Glutathione peroxidase profile. 2 171 IPR000889 GO:0004602|GO:0006979
Vian1g03819 171 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Vian1g03819 171 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Vian1g03819 171 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Vian1g03819 171 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
Vian1g03819 171 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Vian1g03819 171 Gene3D Glutaredoxin 1 169 - -
Vian1g03819 171 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Vian1g03819 171 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Vian1g03819 171 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Vian1g03819 171 PANTHER GLUTATHIONE PEROXIDASE 6 167 IPR000889 GO:0004602|GO:0006979
Vian1g03819 171 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Vian1g03819 171 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Vian1g03819 171 FunFam Glutathione peroxidase 3 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03819 Vian-Chr1 61241496 61243045 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03819 K00432 - gmx:100808523 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03819 1 61241496 61243045 Vian1g03819 1 61241496 61243045 ECH
Vian10g00278 10 2553895 2555233 Vian1g03819 1 61241496 61243045 PCT