Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00278 ATGGCTAGCCAATCAAACACTAAATCATCAGTTCATGATTTCACAGTTAAAGATGCCAGGGGAAATGATGTTAATCTGGGAGATTACAAAGGAAAAGTTCTTCTCATTGTCAATGTTGCCTCACAATGTGGCTTGACTAATTCAAACTACACAGAACTGAATCAAGTATATGATAAATACAAAGGGAAAGGACTTGAAATTCTGGCATTTCCTTGCAATCAGTTTGGGGCTCAGGAACCAGGAACTAATGAAGAGATAGTGGAATTTGCTTGTACTCGCTTCAAAGCTGAGTTTTCCATTTTTGACAAGGTGGATGTGAATGGTGACAATGCTGCTCCACTGTACAAATTTCTGAAATCAAGCAAAGGTGGAGGAGTCCTTGGGGATAGTATCAAATGGAACTTCTCTAAATTTCTTGTTGACAAGGATGGGAATGTGGTTGACCGTTATGCACCAACAACTTCTCCACTAAGCATTGAGAAAGACATAAAGAAGCTGTTGGATGCATGA 510 0.3941 MASQSNTKSSVHDFTVKDARGNDVNLGDYKGKVLLIVNVASQCGLTNSNYTELNQVYDKYKGKGLEILAFPCNQFGAQEPGTNEEIVEFACTRFKAEFSIFDKVDVNGDNAAPLYKFLKSSKGGGVLGDSIKWNFSKFLVDKDGNVVDRYAPTTSPLSIEKDIKKLLDA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00278 169 PRINTS Glutathione peroxidase family signature 65 81 IPR000889 GO:0004602|GO:0006979
Vian10g00278 169 PRINTS Glutathione peroxidase family signature 29 46 IPR000889 GO:0004602|GO:0006979
Vian10g00278 169 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Vian10g00278 169 SUPERFAMILY Thioredoxin-like 10 168 IPR036249 -
Vian10g00278 169 FunFam Glutathione peroxidase 2 169 - -
Vian10g00278 169 CDD GSH_Peroxidase 10 163 IPR000889 GO:0004602|GO:0006979
Vian10g00278 169 ProSiteProfiles Thioredoxin domain profile. 5 169 IPR013766 -
Vian10g00278 169 PANTHER GLUTATHIONE PEROXIDASE 4 167 IPR000889 GO:0004602|GO:0006979
Vian10g00278 169 PIRSF Glutathion_perox 1 169 IPR000889 GO:0004602|GO:0006979
Vian10g00278 169 ProSitePatterns Glutathione peroxidases signature 2. 68 75 IPR029760 -
Vian10g00278 169 ProSitePatterns Glutathione peroxidases active site. 31 46 IPR029759 -
Vian10g00278 169 Pfam Glutathione peroxidase 11 119 IPR000889 GO:0004602|GO:0006979
Vian10g00278 169 ProSiteProfiles Glutathione peroxidase profile. 1 169 IPR000889 GO:0004602|GO:0006979
Vian10g00278 169 Gene3D Glutaredoxin 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00278 Vian-Chr10 2553895 2555233 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00278 K00432 - gmx:100500036 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00278 10 2553895 2555233 Vian1g03819 1 61241496 61243045 PCT