Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03809 ATGTTCAGATGGAGGAGTGAGAAACACAAAGTCAAAGCTGTTTTCAAACTCCACTTCCATGTCACCCAGATGGTGCAATCTGGGGTGGAATCTTTGGTGCTTTCTATAGTTCCAGGCGACATTGGAAAGGTAACTACGAGGTTAGAGAAAGCAGTTATTCGTGGTGGAGTTTGCAGATGGGAGAATCCTGTCTATGAAACAATCAAGCTTTTTCAGGAGCCTAAGACTGGGAAATTCAGTGAGAGAGTATATTATTTTGTGGTTTCAACGGGGTTATCAAAAGCTAGCTCCTTTGGGGAAGTCTCTGTAGACTTTTCTGAGTATGCTGAGGCTACGAAACCCTCCACTGTCTCTCTTCCCATCAAGAATTCTAATTGTGAAGCCGTCTTGCATGTGTCAATCCAGAGGCTGCAAGAAAATAATGATAAAAGACAGCAAGAGGATTGTGAAGATACCGAACTAAAACCCAATGATAGAAGTTTGAGGACCTACTTGAGCAATGGAGAGATAGATGCAAGCTCGAAAAGTGATTCTTCTGAAGATGTGTCTGCCAAAGCAAATGGCAATGGAGCTGAATTGAGTGCTGATTGTAGGACATCCAGTGGATCTGACATTACAACGTTAAGTTCTGATGGAAGCTCTGGACTTGACACACCCAGAGAACTAGGAGTAATAAATGGTGGCATCCACGCCAACAACAATGGTTTTCTTTCAGATGTTAGCCACACATCTGATCCCCAGAAACCTGCTGTAAATGATATTCATCAGAGATCACACTGGGAATGGTCTGGTGGTTCAGAACACAGTTTGAGTACGGATGGCTCAACAAATGGTTCTCAGGATGCTCTTCCTAGGGAAAGATCCCATCAAACATCTGATGTGGAAATTGGAAGACTCAAGGCTGAACTTGCTGCTTTGGCCAGGCAGGTGGATGTGTCAGACTTGGAACTACAGACACTAAGGAAGCAAATTGTAAAGGAGAGCAAAAGAGGACAGGAGCTCTCAAAGGAAATCGTTTGCGTCAAAGAGGAAAGAGATGCACTCAAGGTTGAATGTGACAATCTCAGATCTTTTCATAAACGAATGGAGGATGCCAAACTGAGTAATAGGCCACCCTTGGATAGTGGGGATCTTTGTACTCTTGTTGAAGAAATTAAACAAGAATTGAAGTTTGAGAAGGAGCTGAACGCAAATCTCCAATTACAGTTAAAGAAGACACAAGAGTCTAACGCTGATCTAGTTCTTGCTGTGCAGGACCTGGATGAAATGCTGGAGCAGAAAAATAGGGAAATGTGTAGTCTTTCCAATAAGAACGAAGAGGGTAAAATTTCCCGAGAGTCAGAAGGAAAGTTCTGTAATTCTGAAACGGATGATGAACAGAAAGAATTGGAAGAGCTAGTTAAGGAGCACACCAATGCTCAGGAGACTCACCTACTTGAGCAAAAGATTATAGATCTGTATGGTGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTAGACTATGAGATATTGAAACAGGAAAACCATGATATTGCATATAAGCTGGAACAGAGTGAACTGCAAGAACAATTAAAATTACAGTATGAATGCTCTTCTCCTCCTGCTGTCGATGAAATTGATGCCCATATTCAGAATCTGGAAAATCAACTCAAGCAACAGTCAGAAGAACTCTCAAATTCTCTGGCTACCATCAAGGATCTTGGAACCCAAATCAGCAGATTAGAGGAAGAACTGGAGAAACAAGCCCAAGGATTTGAAGCTGATCTAGATGCCGTGACACGTGCCAAAGTTGAGCAGGAGCAAAGAGCCATTCAAGCAGAAGAAGCTTTGCGAAGCACCAGACTTAAAAATGCTAATACTGCTGAGAGGCTTCAGGAAGAATTTAGAAGGCTCTCAATGCAAATGGCCTCTACATTTGATGCCAACGAGAAGGCTGCCATGAGGGCATTGACAGAAGCAAATGAACTTCGTGCACAGAAAAGACTGGTGGAAGCAATGCTGCACAAAGTCAATGCCGAGCTTCAGTCAGCCAAAACTGATTATGAGGTAAAACTGGATGAACTTTCCAACAAAATAGACATGATGGCTGCTCAGAAACAACAGATGTTGTTGGAAATTGACGACAAGACCAAGCAGCTCGAAAATCAAAAGAAGCGTGAGGAACAAGTTGGTAGGGATTTCTTTGAAGAGATCCAGATGCTAAAAGGTGAAAATGAAAGGCTTAAAGTGGAGATTTCATGCCTCTCTGAGAACGTAGAAAAAAAAGATATCTTAAGAAATGACTTGGAACTCGTGAAGAAATCGCTTGAGGAATCTCAGGCTCGGTTAAATAGTAGAACGGTGGAAAGAAATGAGCTAGTGAGTGAAATTGATCTGTTGAAAAAGGAAGCAGAAAGGTCACTTGATGAGCTAAATAGGATGAAGCATCTCAATGATGAAAAAGAGATTGAGACTAGAGTTTTGCAGTCAGAGTTAGAAGAACTCAGAGCTCAATACAGTGACTTGAAAAGGGCCTGTTTTGAGGACGAAGCTGAGAAAGAAAATCTAAGAAAGCATGTTTTCCAGCTAAAGGGTGAGCTTAAGAAGAAGGACGACGCATTAACCAACATGGAGAAGAGGTTCAAGGATAGCAATGGACGCACACAACTTTCAGATGGAACCAAACACAACTCAAAGAACAAAAAAGGTGCTTCAATTCCTCAGAGTGCAAAAGAAATAGCAAATCTGAGGGAGAAAATTAAAACACTTGAGGGCATGATAAAGTCCAAGGAAACTGCTTTGGAAATGTCAGCTTCTTCATTTTTGGAGAAGGAGAGGGAGCTCCAATCCAAAATCGAGCAACTAGAGGACAAAGTTGAGGAATTCAATCAAAGCATTGCTTTGCAAAAGGTTGATGAGGATAAGGGTATTACTACTTCAAATGATACTACAAGCGTGGCTGAGGAAAACGGTGTTGCATTGACATTGTTGAATAGTAATTTATATTTGCCGGGGAAAGAAGCAGAAAGATCCACAGTGGATGATAATGGAGATGGCAATCTTTGTGAAACTTTAGCTGAATTATCGCTGTTGAAGGAAGGAAACAACTTAATGGAAACTGAGCTTAAAGAGTTACAACAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAGGTAGAAGGTGAAAGACAAAAGCTTGTTATGACTGTAAGAAACCTCAAGAATGCTCGGAAGGCTCAATGA 3252 0.4145 MFRWRSEKHKVKAVFKLHFHVTQMVQSGVESLVLSIVPGDIGKVTTRLEKAVIRGGVCRWENPVYETIKLFQEPKTGKFSERVYYFVVSTGLSKASSFGEVSVDFSEYAEATKPSTVSLPIKNSNCEAVLHVSIQRLQENNDKRQQEDCEDTELKPNDRSLRTYLSNGEIDASSKSDSSEDVSAKANGNGAELSADCRTSSGSDITTLSSDGSSGLDTPRELGVINGGIHANNNGFLSDVSHTSDPQKPAVNDIHQRSHWEWSGGSEHSLSTDGSTNGSQDALPRERSHQTSDVEIGRLKAELAALARQVDVSDLELQTLRKQIVKESKRGQELSKEIVCVKEERDALKVECDNLRSFHKRMEDAKLSNRPPLDSGDLCTLVEEIKQELKFEKELNANLQLQLKKTQESNADLVLAVQDLDEMLEQKNREMCSLSNKNEEGKISRESEGKFCNSETDDEQKELEELVKEHTNAQETHLLEQKIIDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSELQEQLKLQYECSSPPAVDEIDAHIQNLENQLKQQSEELSNSLATIKDLGTQISRLEEELEKQAQGFEADLDAVTRAKVEQEQRAIQAEEALRSTRLKNANTAERLQEEFRRLSMQMASTFDANEKAAMRALTEANELRAQKRLVEAMLHKVNAELQSAKTDYEVKLDELSNKIDMMAAQKQQMLLEIDDKTKQLENQKKREEQVGRDFFEEIQMLKGENERLKVEISCLSENVEKKDILRNDLELVKKSLEESQARLNSRTVERNELVSEIDLLKKEAERSLDELNRMKHLNDEKEIETRVLQSELEELRAQYSDLKRACFEDEAEKENLRKHVFQLKGELKKKDDALTNMEKRFKDSNGRTQLSDGTKHNSKNKKGASIPQSAKEIANLREKIKTLEGMIKSKETALEMSASSFLEKERELQSKIEQLEDKVEEFNQSIALQKVDEDKGITTSNDTTSVAEENGVALTLLNSNLYLPGKEAERSTVDDNGDGNLCETLAELSLLKEGNNLMETELKELQQRYSEMSLKFAEVEGERQKLVMTVRNLKNARKAQ 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03809 1083 Coils Coil 793 855 - -
Vian1g03809 1083 Coils Coil 941 975 - -
Vian1g03809 1083 Coils Coil 741 761 - -
Vian1g03809 1083 MobiDBLite consensus disorder prediction 139 227 - -
Vian1g03809 1083 MobiDBLite consensus disorder prediction 193 216 - -
Vian1g03809 1083 MobiDBLite consensus disorder prediction 263 285 - -
Vian1g03809 1083 Coils Coil 546 626 - -
Vian1g03809 1083 Coils Coil 303 337 - -
Vian1g03809 1083 Coils Coil 1031 1065 - -
Vian1g03809 1083 MobiDBLite consensus disorder prediction 882 912 - -
Vian1g03809 1083 Coils Coil 382 430 - -
Vian1g03809 1083 Coils Coil 765 789 - -
Vian1g03809 1083 Coils Coil 663 733 - -
Vian1g03809 1083 Coils Coil 916 936 - -
Vian1g03809 1083 Coils Coil 483 517 - -
Vian1g03809 1083 Coils Coil 453 476 - -
Vian1g03809 1083 MobiDBLite consensus disorder prediction 139 158 - -
Vian1g03809 1083 MobiDBLite consensus disorder prediction 261 293 - -
Vian1g03809 1083 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1081 - -
Vian1g03809 1083 Gene3D - 817 990 - -
Vian1g03809 1083 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Vian1g03809 1083 MobiDBLite consensus disorder prediction 159 185 - -
Vian1g03809 1083 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 8 143 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03809 Vian-Chr1 61168920 61173649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03809 - - gmx:100819574 1754.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03809 1 61168920 61173649 Vian1g03809 1 61168920 61173649 ECH
Vian10g00286 10 2632924 2637249 Vian1g03809 1 61168920 61173649 PCT