Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00286 ATGTTTCGTTCTGCGAGATGGAGGAGCGACAAGAACAGGGTCAAAGCAGTTTTCAAGCTGCACTTCCATGCCACCCAGGTGTTTCAATCTGGAATGGATGCATTGGTTCTGTCTATAGTTCCAGGGGACATTGGAAAGCCAACTACGAAATTGGAGAAAGCTGCAGTTCGAGATGGAACTTGCAGATGGGACAATCCGGTGTATGAAACTGTGAAATTTGTTCAGGAGTCTAAGACTGGGAAAGTCAGTGATAGAATATATCATTTTTTGGTTTCAACGGGTTTACCAAAAGCTAGTTCCATTGGGGAGGTTTCTATAAACTTTGCTGATTATGTGGAGACCACAAAGCCCTCCTCTGTTTCTCTTCCCATCAGGATTTCTCATTGTGATGCTGTTTTGCATGTATCAATTCAGAGGCTGCAAGAAAACGGTGATCGAAGAGAGGAAGATGAATGCGAAGATTCCAAACTGAAATCCGACGATAGGAGCTCAAGGAACCAATTGAACAACGGCGATACGGATGAAACCACCAAAAGTTATTCTTCTGAAGATGTCTCTGCCAAAGCAATTGTCAATAGAGCTGAATTGAGTTCTAATTACAGGACATCCAGCGGCTCTGATATGACATTGTCAAGTTCTGATGACAGCTCTGGACTCGATACTCCCCGCGAAATTGGAACAAGAAAAAAGAACATCCACCTCAACACCAAAGGGTTTCTTCCAGATCCTGTTCTGCTCCATGCTTCAGAACCTCAAAACCTTGCTCTCAATGCCTCAACATCAATGCATGATGTGCATCAGAGATCACACTGGGACTGGTCAGCCGGGTCGGAGCACAGGCTAAGTACAGATGATGCAACATATGGTTCTCATCATAATTCTCTTCTAAAGGAAAGCTGCCAACAACCTTCCCCTTTAGAGATTGAAAGTCTCAAAGCTGAACTGGCTGCTTTGGCCAGGCAGGTAGATGTGTCGGACTTGGAATTACAGACCCTTAGGAAGCAAATTATGAAGGAATGCAAAAGAGGGCAGGATCTTACGAAGGAAATCGTTGTCTTGAAAGGGGAAAGGGATGCATTCAAGACAGAATGTGACAGTCTCAAGTCTTTTCAGAAACGCATGGAAGAGGCCAAAGTGAGAAATAGGTCACAGTTGGAAGGTGGAGACCTTCATGCTCTTGTTGAAGAAATAAGAGAAGAATTGGATTATGAGAAAGACCTCAATGCAAATCTCAGGTTACAGTTAAAGAAGATGCAAGAATCTAATGCCGAACTGGTTCTTGCTGTGCAGGACCTGGATGAAATGTTGGAGCAGAAAAATAGTCATACGTGTAACCATTCCTATGCAAACGACCAGGATAAAATTTCAGCGGAGAAAAAGATAAACCTCTCTAAATGTGAATCGGATGATGATGATGAAGAACAGAAAGCATTGGACGAGCTGGTTAAGGAACACGCCGAAGCCAAGGAGACACACATACTGGAGAAGAAAATAGTAGACCTCTATGGTGAAATAGAGATGTACAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAACAGCTCGCACTGGACTATGAGATATTGAAGCAGGAAAACCATGGCCTTGCATATAAGCTGGAGCAAAGCGAACTGCAAGACCAGCTGAAAATGCAGTACGAATGTTCATCTTCTCCTTCTGCAATGAATGACATTGAAATCCACATCAAGAATCTGGAAAATCAACTAAAGGAACAATCAGAAGATTTCACAAATTCTCTGGCTACCATCAAGGCACTTGAAACCCATATCAGAAAATTGGAAGAGGAAATGGAGAAGCAAGCACAAGGATTTGAAGCTGATCTAGAAGCAGTGACGCGTGACAAAGTTGAACAAGAACAGAGAGCTATCCAAGCGGAGGAAGCTTTGCGAAAGACCAGACTGAGAAATGCTAAAACTGCTGAGAGGCTGCAAGAGGAATTCCGAAGGCTCTCCACACAAATGACCACAACATTTGATGCGAATGAGAAGGCTACCATGAAAGCATTGACAGAAGCGTGTGAAGTGCGTGCACAGAAAAGGGTACAGGAGGAAGAGCTGGATAAAGTCAAAGAAGAACTTGAGTCAACTACTGCTGAGTATGAGGTAAAACTGAACCAACTTTCCAACCAAGTAGATATGATGAAAGGGCAGATACAACAGATGTTGTTGGAAATTGAGGACAAGTCCAAGCAGCTTGAAAATCAGAAGAAGCACGAGGAACAAGTTAGTAGGGATTTCTCTAATGAGATCGGATTACTAAAAGCTGAGATTGGAAAGCATAACATGGAGATTTCATGCTTACTTGTGCAACTAGAAGATAAGGAAAATTTAAAAACTGATTTGGAAATTATGAAGAAATCAGTAGAGGAATTTGAGACACTTTTACAGAAAGGAACTGTGGAAAGAAATGAACTGTTGGCAACAATTGAATTGTTGAAGAGGGAGGCAGAAGAGTCACTTAATGAGCTAAACAGAATCATCCATCTCAAGGATGAAAAAGAAACTGAGGTCAGAGTCTTGCAGTCAGAGTTGGAGGCCGTCAGAGCTCAGTACAATGACCTGAAACACTATTTTTCTAAGGAAGAAGTTGAGAAAGAAAAACTGCTAAAGCAAGTTTTCCAGCTAAAGGCTGAATTGAAGAAGAAAGATGATGCTTTAATCAGCTTCGAGAAGAGGTTCAGGGAAAGTAGTGCACGCGCACAACTTAGCGATGGAACTAAAAATATTCTAAAGAACAAAAAAACTGCTTCAGTTCCTCAGAATTCAAAGGAAATAGCCACTCTGAAGGAGAAAATAAAAACGCTTGAGGGCTTGATACAGACAAAGGAAACAACCTTGGAAACTTCAACAACTTCATTTTTGCAGAAGGAAAAGAAACTCCAGACCAAAATTGAGGAGCTGGAGAACAAGGTAGAGGAATTCAACCGAAGTGTTGCTTTGCAGAAGGTGGTTCAAGATAGAAGTTTTACAGCTTCCAATGAGATATCTGCTGAGCTAACATCGTTGAAGGAAAGAAACAAATCAATGGAAAGTGAACTTAAAGAGATGCAAGAGAGATACTTAGAAATGAGCCTCAATTTTGCGGAGGTAGAAGGTGAAAGACAAAAGCTTGTGATGGCTGTACGGAATCTCAAGAGTACCCAGAAAGGCTAA 3174 0.4187 MFRSARWRSDKNRVKAVFKLHFHATQVFQSGMDALVLSIVPGDIGKPTTKLEKAAVRDGTCRWDNPVYETVKFVQESKTGKVSDRIYHFLVSTGLPKASSIGEVSINFADYVETTKPSSVSLPIRISHCDAVLHVSIQRLQENGDRREEDECEDSKLKSDDRSSRNQLNNGDTDETTKSYSSEDVSAKAIVNRAELSSNYRTSSGSDMTLSSSDDSSGLDTPREIGTRKKNIHLNTKGFLPDPVLLHASEPQNLALNASTSMHDVHQRSHWDWSAGSEHRLSTDDATYGSHHNSLLKESCQQPSPLEIESLKAELAALARQVDVSDLELQTLRKQIMKECKRGQDLTKEIVVLKGERDAFKTECDSLKSFQKRMEEAKVRNRSQLEGGDLHALVEEIREELDYEKDLNANLRLQLKKMQESNAELVLAVQDLDEMLEQKNSHTCNHSYANDQDKISAEKKINLSKCESDDDDEEQKALDELVKEHAEAKETHILEKKIVDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHGLAYKLEQSELQDQLKMQYECSSSPSAMNDIEIHIKNLENQLKEQSEDFTNSLATIKALETHIRKLEEEMEKQAQGFEADLEAVTRDKVEQEQRAIQAEEALRKTRLRNAKTAERLQEEFRRLSTQMTTTFDANEKATMKALTEACEVRAQKRVQEEELDKVKEELESTTAEYEVKLNQLSNQVDMMKGQIQQMLLEIEDKSKQLENQKKHEEQVSRDFSNEIGLLKAEIGKHNMEISCLLVQLEDKENLKTDLEIMKKSVEEFETLLQKGTVERNELLATIELLKREAEESLNELNRIIHLKDEKETEVRVLQSELEAVRAQYNDLKHYFSKEEVEKEKLLKQVFQLKAELKKKDDALISFEKRFRESSARAQLSDGTKNILKNKKTASVPQNSKEIATLKEKIKTLEGLIQTKETTLETSTTSFLQKEKKLQTKIEELENKVEEFNRSVALQKVVQDRSFTASNEISAELTSLKERNKSMESELKEMQERYLEMSLNFAEVEGERQKLVMAVRNLKSTQKG 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00286 1057 Coils Coil 498 532 - -
Vian10g00286 1057 MobiDBLite consensus disorder prediction 200 220 - -
Vian10g00286 1057 Coils Coil 471 491 - -
Vian10g00286 1057 MobiDBLite consensus disorder prediction 200 225 - -
Vian10g00286 1057 Coils Coil 957 991 - -
Vian10g00286 1057 Coils Coil 394 438 - -
Vian10g00286 1057 Coils Coil 562 642 - -
Vian10g00286 1057 Coils Coil 872 892 - -
Vian10g00286 1057 MobiDBLite consensus disorder prediction 143 168 - -
Vian10g00286 1057 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Vian10g00286 1057 MobiDBLite consensus disorder prediction 143 185 - -
Vian10g00286 1057 Coils Coil 686 756 - -
Vian10g00286 1057 MobiDBLite consensus disorder prediction 169 185 - -
Vian10g00286 1057 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 146 IPR019448 -
Vian10g00286 1057 Coils Coil 932 952 - -
Vian10g00286 1057 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 983 - -
Vian10g00286 1057 Coils Coil 781 857 - -
Vian10g00286 1057 Coils Coil 999 1040 - -
Vian10g00286 1057 Coils Coil 308 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00286 Vian-Chr10 2632924 2637249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00286 - - pvu:PHAVU_002G155900g 1742.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00286 10 2632924 2637249 Vian1g03809 1 61168920 61173649 PCT