Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03802 ATGGCGTTGCAGGATAGGTTAGACAAGTTCAAGAAACAGCAAGAGAAGTGCCAAGCGACACTGTCAAGCATTGCAGCAAGCCAAAAATCTGCCTCACATGGTTCGGCCAATGGAAAAAACGTGCCCTCTGCGGTTAAGTTTTCGAACGACACGGAGAGGCTCCAGCATATTAACAGCATACGTAAAGCCCCCGTGGGTGCTCAGATGAAGCGTGTTATTGATCTCCTACTAGAGACAAGACAAGCTTTAACACCGGAGCAGATAAACCAGTCGTGCTATGTTGACATAAAGGCTAACAAAGATGTCTTTGAGAATCTTAGGAAAAACCCGAAAGTGAATTATGATGGCCAACGATTCTCTTACAAGTCAAAGTACGGGCTTAAGGACAAAACAGAACTTCTTCAACTGATACGTAAGTATCCTGAGGGCCTTGCTGTTATTGACTTAAAGGATGCTTACCCCACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTGCGGGGCAGATTTGGCTACTGTCCAACTTTGATTCACAGGAAGACATTGCCTACCCTAACGACCCCAAATTGCACATTAAGGTGGATGATGATCTAAAACAGCTTTTCCGGAGTATTGAATTGCCTCGTGATATGATTGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCCGCCACCAACACTGCAAAGAGGAGGAGTGCAGCACAAATTCAAGGCATTTCTTCCAAGCCCAAGCCTAAGAAGAAGAAGAGTGAAATCAACAAGAGAACGAAGCTGACCAATGCTCATCTTCCAGAGCTTTTTCAAAACCTGAACAATTCCTGA 825 0.4436 MALQDRLDKFKKQQEKCQATLSSIAASQKSASHGSANGKNVPSAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQALTPEQINQSCYVDIKANKDVFENLRKNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPKLHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGISSKPKPKKKKSEINKRTKLTNAHLPELFQNLNNS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03802 274 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 53 128 IPR003166 GO:0006367
Vian1g03802 274 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 272 IPR016656 GO:0005673|GO:0006367
Vian1g03802 274 Pfam TFIIE beta subunit core domain 67 125 IPR003166 GO:0006367
Vian1g03802 274 PIRSF TFIIE-beta 2 273 IPR016656 GO:0005673|GO:0006367
Vian1g03802 274 MobiDBLite consensus disorder prediction 221 240 - -
Vian1g03802 274 Pfam TFA2 Winged helix domain 2 128 185 IPR040501 -
Vian1g03802 274 MobiDBLite consensus disorder prediction 220 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03802 Vian-Chr1 61063870 61066114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03802 K03137 - gmx:100802433 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03802 1 61063870 61066114 Vian1g03802 1 61063870 61066114 ECH
Vian10g00289 10 2658176 2661634 Vian1g03802 1 61063870 61066114 PCT