Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00289 ATGGCGTTTCAGGAAAAGGGAAACAGGTTTAAAAGGCAGCCAGAGAAGAATTCTTCGGCTTCAAACAATGGAAGAACTCCAGGTGCTGTCAAGTTCTCTAACGACACGGAAAGACTTCAACATGTTAATAGCATCCGCAAAGCACCAGTAGGGGCTCAGATGAAGCGTGTTATTGATCTCCTTTTTGAGACCCGAAAGGCTTTAACGATGGAGCAAATAAATGAAGCGTGTTATGTGGACATGAGAGCTAATAAAGATGTTTTTGAGAGTATGAGGAAAAACCCAAAAATAAAATATGATGGGGAAAGATTCTCTTACAAGTCCAAGCATGATATTAGGGACAAAAGTCAGCTGCTTGTCCTGGTGCGTAAGTTTCCAGAGGGTATTGCTGTTGTTGACCTAAAAGATTCTTACCCAACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTTCAAGGGAGGTTTGGCTGTTATCCAACTTTGACTCACAAGAGGACATTGCCTACCCGAATGATCCTAAAGTGCCCATTAAGGTGGATGATGACCTAAAACAGCTTTTTCGGGAGATTGAATTGCCTCGTGATATGATTGACATAGAGAGGGATCTACAAAAGAACGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCAGCGCAAATGGAAGGCATTTCAACAAAGCCTAAACCTAAGAAGAAGAAGAATGAAATCACTAAGAGGACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTTCAGAATTTAAAATGA 774 0.4212 MAFQEKGNRFKRQPEKNSSASNNGRTPGAVKFSNDTERLQHVNSIRKAPVGAQMKRVIDLLFETRKALTMEQINEACYVDMRANKDVFESMRKNPKIKYDGERFSYKSKHDIRDKSQLLVLVRKFPEGIAVVDLKDSYPTVMEDLQALKASREVWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFREIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISTKPKPKKKKNEITKRTKLTNAHLPELFQNLK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00289 257 MobiDBLite consensus disorder prediction 1 31 - -
Vian10g00289 257 Pfam TFA2 Winged helix domain 2 113 170 IPR040501 -
Vian10g00289 257 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 11 257 IPR016656 GO:0005673|GO:0006367
Vian10g00289 257 Pfam TFIIE beta subunit core domain 52 112 IPR003166 GO:0006367
Vian10g00289 257 MobiDBLite consensus disorder prediction 14 30 - -
Vian10g00289 257 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 38 113 IPR003166 GO:0006367
Vian10g00289 257 MobiDBLite consensus disorder prediction 208 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00289 Vian-Chr10 2658176 2661634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00289 K03137 - gmx:100788089 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00289 10 2658176 2661634 Vian1g03802 1 61063870 61066114 PCT