Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03790 ATGGGCGAGGAAGAGAAAAAACCAGAGGAAACCAAAGTGGAGGAGAAAAAAGCAGAGGAACCCAAGGAGGAGAAGAAACCCGAGCAAGACAAAAAACCAGAGGAGTCAAAAGATGAAAAGGAATCCAAGGAGGAGGAATCTGCGCCGCCACCGCCAGAAATCGTGCTTAGAGTCTTCATGCATTGCGAGGGTTGTGCTCGCAAGGTTCGTCGCTCCCTCAAAGGATTCCCAGGGGTGGAAGATATTCTAACGGATTGCAAGTCTCACAAGGTGGTGGTGAAAGGCGAAAAGGCGGATCCGCTGAAGGTTCTAGAAAGAGTACAGAGGAAGAGCCACAGAAAGGTTGAGCTTCTCTCTCCTATCCCAAAACCACCAGCGGAAGAAGAGAAAAAGCCCGAAGAGGAAGAGAAGCCCAAACCAGAGGAGAAGAAAGAAGAGGTTATCACAGTGGTTCTGAAAGTCCACATGCATTGCGAGGCGTGCTCGCAGGAAATCAAGAGACGGATCGAGAAAATGAAAGGGGTGGAGTCAGTGGAAGCAGATCTGAAGAGTTCAGAGGTGAGCGTGAAGGGGGTGTTCGAGGCAGAGAAGCTGGTGGAGCACGTGTCGAAGAGGACAGGGAAGCATGCAGTGATAGTGAAGCAGGAGGCAGAGAAGAAGGAGGGAGAAGGAAAAGAAGAGAGCAAAGGGGAGAAGAAGGGAGAGGAAGGTGAGAAGAAGGAGAAAGAGAATGGTGAAGGAGAAGAGAAGAAGAAGAAAGAAGGAGAAGGTGAAGGAAAAGCAGAAGAAGGAGGCACAGAAGAAAACACAGTGATGGAGCTGAAAAAAAGTGAGTATTACTACAACCCTCCAAGGTATGGAATGGAGTTCTATGCATACCCTGGACCAGCTTACCCTCCCCAGATCTTCAGTGATGAGAACCCCAATGCCTGTTCTGTCATGTAA 945 0.4921 MGEEEKKPEETKVEEKKAEEPKEEKKPEQDKKPEESKDEKESKEEESAPPPPEIVLRVFMHCEGCARKVRRSLKGFPGVEDILTDCKSHKVVVKGEKADPLKVLERVQRKSHRKVELLSPIPKPPAEEEKKPEEEEKPKPEEKKEEVITVVLKVHMHCEACSQEIKRRIEKMKGVESVEADLKSSEVSVKGVFEAEKLVEHVSKRTGKHAVIVKQEAEKKEGEGKEESKGEKKGEEGEKKEKENGEGEEKKKKEGEGEGKAEEGGTEENTVMELKKSEYYYNPPRYGMEFYAYPGPAYPPQIFSDENPNACSVM 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03790 314 MobiDBLite consensus disorder prediction 210 273 - -
Vian1g03790 314 ProSiteProfiles Heavy-metal-associated domain profile. 147 211 IPR006121 GO:0046872
Vian1g03790 314 SUPERFAMILY HMA, heavy metal-associated domain 145 215 IPR036163 GO:0046872
Vian1g03790 314 Gene3D - 51 123 - -
Vian1g03790 314 MobiDBLite consensus disorder prediction 1 54 - -
Vian1g03790 314 Gene3D - 144 213 - -
Vian1g03790 314 ProSiteProfiles Heavy-metal-associated domain profile. 51 115 IPR006121 GO:0046872
Vian1g03790 314 SUPERFAMILY HMA, heavy metal-associated domain 56 110 IPR036163 GO:0046872
Vian1g03790 314 CDD HMA 151 210 IPR006121 GO:0046872
Vian1g03790 314 Pfam Heavy-metal-associated domain 55 110 IPR006121 GO:0046872
Vian1g03790 314 Pfam Heavy-metal-associated domain 152 209 IPR006121 GO:0046872
Vian1g03790 314 MobiDBLite consensus disorder prediction 1 50 - -
Vian1g03790 314 CDD HMA 60 116 IPR006121 GO:0046872
Vian1g03790 314 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 33 314 IPR044577 GO:0046872
Vian1g03790 314 MobiDBLite consensus disorder prediction 113 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03790 Vian-Chr1 60922368 60923891 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03790 - - gmx:100796289 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03790 1 60922368 60923891 Vian1g03790 1 60922368 60923891 ECH
Vian1g03790 1 60922368 60923891 Vian4g00975 4 14501438 14503179 PCT