Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03482 ATGAAAGAAGTGAAGGTCAAATCCCAAAACAAGCTTGAGACTTGGACTGCTTTGGTTGTTTTGTTTCTGCTTGTGTTGATTCTGAAGGAGTCGATCATGGGAGGTAAGAGTTCGAAAGTCTGTGAAAGAAGGCATGCTTCATCGTATGGATCTGCTGGTTCATCGTCTTCATGGGATACCTATGGATACCCTCAGACACCAAACGTTTACCCACAACAAAATAATTATCATACGCCTCTTCATAACCGTGCCCCCACTCCATTCCACGACTATTCACAGCCAAAAAGGAGGTTGGATAGGAGATACTCCAGAATAGCTGATGATTACAATTCACTTGACGAGGTTACCAGTGCTCTTTCACACGCTGGACTCGAATCTTCTAACCTCATTGTTGGCATTGATTTTACAAAGAGCAACGAGTGGACAGGGAAGAGGTCGTTCAACCGAAAAAGCTTACATCATATAGGAAGTGACCATAATCCTTATGAACAAGCAATCACGATTATTGGGAAAACATTAAGTGCTTTTGATGACGATAATTTGATTCCTTGTTTTGGTTTTGGAGACGCATCAACGCATGATCAAGATGTCTTTAGTTTCCATTCAGATGAGAGGTTCTGCAATGGATTTGAAGAAGTTCTGTCAAGATATAGAGATATTGCTCCTCGCCTGCGTCTAGCAGGACCCACTTCATTTGCTCCTATTATTGAGATGGCTATGACTATAGTTGAACAAAGTGGGGGCCAATATCATGTCTTGCTAATAATTGCTGATGGACAGGTGACCAGAAGTGTTGACACGCAACATGGCCAGTTAAGTCCACAAGAACAGAAGACAATTGATGCAATTGTAAAAGCAAGTGAGTATCCACTTTCAATAGTTTTGGTGGGGGTTGGTGATGGACCGTGGGAAATGATGAAGGAGTTTGACGACAACATTCCAGCCCGAGCATTTGACAATTTTCAGTTTGTGAACTTTACAGAAATAATGTCAAGGAATGTAGATTCAAGAAGAAAAGAGACAGACTTTGCTCTATCAGCTCTGATGGAGATACCTTCCCAATATAAGGCAACTATAGATCATGGCATCCTGGGCACAACATCTTTTCGTCCAAACAGTTCTCAGCAAAGTGCACCTACGTATTCTGACTTTGATAATGTTAACATGGCATCGTCTTCAGGTGGCTTATATGATAACAAGATTTTTCCTGTCACGTACAACAAGTTGACAATGATTACATATACACGGTTAATTTTGCAGGTTTGTCCAATTTGTCTGACTAACGGGAAGGATATGGCATTTGGTTGCGGGCATCAGGGCATTGTATTAACTTTATGTCCTATTGTTATTTCCTCAAATGGTGCAGACTTGTTGCGAATGTGGAGAAAACCTCGAATTCTGCCCCATATGCCGAAGCACAATCACTACAAGAATAAAGCTTTACTAGTTAACCTTGCATGGGAGAAGTGTAAACCATGTGAACTGTAG 1488 0.4126 MKEVKVKSQNKLETWTALVVLFLLVLILKESIMGGKSSKVCERRHASSYGSAGSSSSWDTYGYPQTPNVYPQQNNYHTPLHNRAPTPFHDYSQPKRRLDRRYSRIADDYNSLDEVTSALSHAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHHIGSDHNPYEQAITIIGKTLSAFDDDNLIPCFGFGDASTHDQDVFSFHSDERFCNGFEEVLSRYRDIAPRLRLAGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTQHGQLSPQEQKTIDAIVKASEYPLSIVLVGVGDGPWEMMKEFDDNIPARAFDNFQFVNFTEIMSRNVDSRRKETDFALSALMEIPSQYKATIDHGILGTTSFRPNSSQQSAPTYSDFDNVNMASSSGGLYDNKIFPVTYNKLTMITYTRLILQVCPICLTNGKDMAFGCGHQGIVLTLCPIVISSNGADLLRMWRKPRILPHMPKHNHYKNKALLVNLAWEKCKPCEL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03482 495 PANTHER COPINE FAMILY PROTEIN 1 68 446 - -
Vian1g03482 495 Pfam Copine 151 363 IPR010734 -
Vian1g03482 495 SUPERFAMILY vWA-like 128 310 IPR036465 -
Vian1g03482 495 SMART VWA_4 126 329 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03482 Vian-Chr1 57372694 57379274 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03482 K16280 - gmx:100800161 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03482 1 57372694 57379274 Vian1g03482 1 57372694 57379274 ECH
Vian1g03482 1 57372694 57379274 Vian2g03129 2 51875437 51878961 PCT