Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02067 ATGGCGGAGAAGACATTCGGCGGCGTGATAGGGTATGCGCTGGCACCGAAGAAGCAGAACAGCTTTATCCGCGACTCATTGGTGAGTCTAGCGAAATCGCGAGGGATCGAACTCGTTCGTGTGGACTCGGACAAGCCCCTCGCGGATCAGGGCCCCTTCGATTGCGTCCTCCACAAGCTCTACGGCGACGATTGGAAACGCCAACTTCGAGAATTCCAGTCTCGCTTCCCAAATGCGGTTATCCTCGACGCGCCCGAAGCGATCGAGCGCCTCCACAACCGAATCTCGATGCTGCAGGTCGTGTCGGAGCTCCGAATCCAGGACCGAACCGAGACCTTTGGGATCCCAAAACAGATTGTGATATACGACAAGGCCACGCTAATGGACCCCCAGGCCGGGGATAGCCTCAAGTTTCCGGTGATTGCGAAGCCGCTTGTGGCCGACGGCAGTGCCAAGTCGCACAAGATGGCGCTTGTGTTCACGCGCGACGCGCTCGATAAGCTGAAGCCCCCGATCGTGCTGCAGGAGTTTGTCAACCACGGCGGCGTGATCTTCAAGGTTTACGTGGTGGGCGAGCACGTGCGGTGCGTGAAGCGCAAGTCCCTACCCGATGTGTCGGAGGAGAAGACGGTGGGCGTTTCGGAGAACCTTCTGTCGTTTTCGCAGGTCTCCAACCTGGCTAACCACGACGTTGAAAACGACAGCGATGGCTATTACCGGCTGATGCATTTGGAGGACACCGAGATGCCCCCAAATGCCTTTGTCGTCGACATCGCTAGGGGCCTCAGGCGGGCCCTTAAGTTGAACCTCTTCAATTTCGACGTCATAAGGGACGCTCGATATGGCAATCGATATCTCATCATTGATATCAATTATTTCCCTGGCTACGCCAAAATGCCTGGATACGAGGCCCTCAAATGTGTTTCTCCTTCTGTACGTATCGTTGGTTGGTGGCTTTTGGGTAACCATACTTTCCCCAGTGGACCCATTGGCCTCATTGGTTGTATTGCTATAGATGCTATGCAGCCTGCAATTTGGTCTGCTACACTAAACAACTCTTCCACAGCCGACCCTGTAGTAGGCAGGTTGAATCCTGTCCAAGTTTTTATGCCAAACAAGGAGTTTGTTCTCATCATTAGTCTTAGGAAGAGAGCCAGTGATGCTATTTTCAAGTTGATACGCCAGATTGAATGGAATAGAAAAAAGAAGTGGCTTTTCCACGTAGAGATTTTGTCTCATGCTTGTAGATAA 1251 0.5284 MAEKTFGGVIGYALAPKKQNSFIRDSLVSLAKSRGIELVRVDSDKPLADQGPFDCVLHKLYGDDWKRQLREFQSRFPNAVILDAPEAIERLHNRISMLQVVSELRIQDRTETFGIPKQIVIYDKATLMDPQAGDSLKFPVIAKPLVADGSAKSHKMALVFTRDALDKLKPPIVLQEFVNHGGVIFKVYVVGEHVRCVKRKSLPDVSEEKTVGVSENLLSFSQVSNLANHDVENDSDGYYRLMHLEDTEMPPNAFVVDIARGLRRALKLNLFNFDVIRDARYGNRYLIIDINYFPGYAKMPGYEALKCVSPSVRIVGWWLLGNHTFPSGPIGLIGCIAIDAMQPAIWSATLNNSSTADPVVGRLNPVQVFMPNKEFVLIISLRKRASDAIFKLIRQIEWNRKKKWLFHVEILSHACR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02067 416 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 9 88 IPR041429 -
Vian1g02067 416 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 9 304 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vian1g02067 416 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 109 304 IPR040464 -
Vian1g02067 416 FunFam Inositol-tetrakisphosphate 1-kinase 84 295 - -
Vian1g02067 416 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 85 296 - -
Vian1g02067 416 Gene3D - 86 295 - -
Vian1g02067 416 FunFam Inositol-tetrakisphosphate 1-kinase 118 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02067 Vian-Chr1 24940154 24944013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g02067 K00913 - gmx:100127430 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02067 1 24940154 24944013 Vian1g02067 1 24940154 24944013 ECH
Vian10g01098 10 13010863 13011909 Vian1g02067 1 24940154 24944013 PCT